RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 MYO1HQ8N1T3 1032 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 KIF2BQ8N4N8 673 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 SVOPQ8N4V2 548 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PACSIN1Q9BY11 444 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CAPN10Q9HC96 672 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ENOPH1Q9UHY7 261 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ANKARQ7Z5J8 1434 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ATP7BP35670 1465 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 A0A1W2PQJ5 194 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PIPSLA2A3N6 862 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 H3BMM5 538 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF185O15231 689 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PEX1O43933 1283 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 RARBP10826 455 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 UCHL3P15374 230 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 FEN1P39748 380 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 MGAT5BQ3V5L5 792 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ARMC4Q5T2S8 1044 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 SNX30Q5VWJ9 437 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ERP44Q9BS26 406 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 EMILIN2Q9BXX0 1053 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CARD9Q9H257 536 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CD209Q9NNX6 404 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 MRPL39Q9NYK5 338 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PNMA8BQ9ULN7 279 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 AAR2Q9Y312 384 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 FAM220BPB1ANY3 271 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 TIMM44O43615 452 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 FLT3P36888 993 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ITGA1P56199 1179 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 POLD3Q15054 466 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 TDRD10Q5VZ19 366 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 VN1R5Q7Z5H4 357 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 RMND5BQ96G75 393 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 WDR24Q96S15 920 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 NOD2Q9HC29 1040 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM8AQ9HCN3 771 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL28Q9NXS3 571 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PP2D1A8MPX8 630 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TRIM49D1C9J1S8 452 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 DNALI1O14645 258 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CST8O60676 142 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 STIP1P31948 543 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ETFBP38117 255 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NFYCQ13952 458 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PTGISQ16647 500 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NFIL3Q16649 462 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MICALL2Q8IY33 904 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RDM1Q8NG50 284 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ADAM33Q9BZ11 813 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 E2F8A0AVK6 867 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RAD51CO43502 376 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 PDE9AO76083 593 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RBP3P10745 1247 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SLC11A2P49281 568 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ATP12AP54707 1039 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ILF2Q12905 390 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM132BQ14DG7 1078 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RCN1Q15293 331 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MROH9Q5TGP6 573 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 TIGD7Q6NT04 549 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 GLB1LQ6UWU2 654 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 BARGINQ6ZT62 677 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NT5DC4Q86YG4 428 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ARID3BQ8IVW6 561 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 FEZF2Q8TBJ5 459 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 UCMAQ8WVF2 138 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SUPT7LO94864 414 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 BMP10O95393 424 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 MMP10P09238 476 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CNPP09543 421 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ATP6V1C1P21283 382 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 COMTP21964 271 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 CNTFP26441 200 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 COILP38432 576 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ATP6AP1LQ52LC2 224 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 BOLA3Q53S33 107 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF618Q5T7W0 954 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 LBHD1Q9BQE6 289 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-205ENST00000461221 ADI1Q9BV57 179 aa9.31□□□□□ -0.92
BRCA1-205ENST00000461221 SLITRK2Q9H156 845 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms