RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PLXND1Q9Y4D7 1925 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 TRAV19A0A0A6YYK7 116 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 TNNC2P02585 160 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 USP17L7P0C7H9 530 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 GJA4P35212 333 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 PXNP49023 591 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-216ENST00000461187 GALK1P51570 392 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 AMPD2Q01433 879 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 USP4Q13107 963 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 SURF1Q15526 300 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 DUOXA2Q1HG44 320 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 NAIF1Q69YI7 327 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-216ENST00000461187 STXBP4Q6ZWJ1 553 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 CEP68Q76N32 757 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 EPM2AIP1Q7L775 607 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-216ENST00000461187 NETO1Q8TDF5 533 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 SYT15Q9BQS2 421 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 TRIM9Q9C026 710 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 TRPC7Q9HCX4 862 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 CRTAC1Q9NQ79 661 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-216ENST00000461187 CDH9Q9ULB4 789 aa15.74■□□□□ 0.11
SMPD4-216ENST00000461187 R3HCC1Q9Y3T6 440 aaKnown RBP15.74■□□□□ 0.11
SMPD4-216ENST00000461187 TNRC6BQ9UPQ9 1833 aaKnown RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CCDC163A0A0D9SF12 145 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 SLC30A4O14863 429 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 SPTLC2O15270 562 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 ATG13O75143 517 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 RNF40O75150 1001 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 PPP6R2O75170 966 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CKMP06732 381 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 DRD1P21728 446 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 WARSP23381 471 aaKnown RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 PSMC1P62191 440 aaKnown RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CNNM4Q6P4Q7 775 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 C4orf50Q6ZRC1 276 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 WDR49Q8IV35 697 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CPA6Q8N4T0 437 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 ARL14EPQ8N8R7 260 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 OSCP1Q8WVF1 389 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 GAB3Q8WWW8 586 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 MYLPFQ96A32 169 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 SPATA17Q96L03 361 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 P2RY13Q9BPV8 354 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CUEDC2Q9H467 287 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 ECT2Q9H8V3 914 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 KIAA1586Q9HCI6 787 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 POLR3BQ9NW08 1133 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 DUS2Q9NX74 493 aaKnown RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 TFIP11Q9UBB9 837 aaKnown RBP15.73■□□□□ 0.11
SMPD4-216ENST00000461187 SLC8A2Q9UPR5 921 aa15.73■□□□□ 0.11
SMPD4-216ENST00000461187 CHD8Q9HCK8 2581 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 K7ELQ4 463 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-216ENST00000461187 TGFB1I1O43294 461 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 GDF9O60383 454 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 TCF3P15923 654 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 BDNFP23560 247 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 ASIC1P78348 528 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 EML3Q32P44 896 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 VSTM1Q6UX27 236 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 TRAPPC11Q7Z392 1133 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 EZH1Q92800 747 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-216ENST00000461187 DHX58Q96C10 678 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 NME7Q9Y5B8 376 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
SMPD4-216ENST00000461187 KMT2BQ9UMN6 2715 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 AXIN1O15169 862 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 RPP40O75818 363 aaKnown RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 CST3P01034 146 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 PDGFRBP09619 1106 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 HDCP19113 662 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 RAP1GAPP47736 663 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 IFNAR2P48551 515 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 USP46P62068 366 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 AMPD3Q01432 767 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 MAPRE1Q15691 268 aaKnown RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 SNRNP35Q16560 246 aaKnown RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 FBXO43Q4G163 708 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 FAM26FQ5R3K3 315 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 CACNA2D4Q7Z3S7 1137 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 KBTBD6Q86V97 674 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 CAMKK1Q8N5S9 505 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 RDH13Q8NBN7 331 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 SH3RF2Q8TEC5 729 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 ATP2A3Q93084 1043 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 PCED1BQ96HM7 432 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 CEP295NLQ96MC4 621 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 MMS19Q96T76 1030 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.11
SMPD4-216ENST00000461187 MRPL45Q9BRJ2 306 aaKnown RBP15.71■□□□□ 0.11
SMPD4-216ENST00000461187 AGPAT3Q9NRZ7 376 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms