RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MNS1Q8NEH6 495 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 UHMK1Q8TAS1 419 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 LMBR1Q8WVP7 490 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 CLEC4DQ8WXI8 215 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 DLG3Q92796 817 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 TIGD1Q96MW7 591 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 WWC2-AS2Q96NR7 200 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 MYL10Q9BUA6 226 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 UPF3BQ9BZI7 483 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 MS4A5Q9H3V2 200 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 SEC61A2Q9H9S3 476 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 ACSS2Q9NR19 701 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 RNF186Q9NXI6 227 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 OBP2AQ9NY56 170 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 CALCOCO1Q9P1Z2 691 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 SWAP70Q9UH65 585 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 CPA4Q9UI42 421 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 DSEQ9UL01 958 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 STX8Q9UNK0 236 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 CEP83Q9Y592 693 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 NUB1Q9Y5A7 615 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA9Q9Y5G4 932 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA8Q9Y5G5 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA7Q9Y5G6 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA6Q9Y5G7 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA3Q9Y5H0 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 PCDHGA2Q9Y5H1 932 aa5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 KIAA0100Q14667 2235 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-203ENST00000460928 LAMA2P24043 3122 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 KLHL33A6NCF5 533 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 VSTM5A8MXK1 200 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 PDHXO00330 501 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CYR61O00622 381 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 B4GALT4O60513 344 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 H2AFYO75367 372 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 NDUFB10O96000 172 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 KNG1P01042 644 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 LTFP02788 710 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CYP17A1P05093 508 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 PTX3P26022 381 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CYP2C19P33261 490 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 HSPA4P34932 840 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC16A2P36021 539 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 ACVRL1P37023 503 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 GDF5P43026 501 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 BACE1P56817 501 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CCDC173Q0VFZ6 552 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CRHR2Q13324 411 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 SNAPC2Q13487 334 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 GTF2H3Q13889 308 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 PDCD1Q15116 288 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CLUL1Q15846 466 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC35G1Q2M3R5 365 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 FAM83BQ5T0W9 1011 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 SYCP2LQ5T4T6 812 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 Q6ZUG5 572 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 FRMD7Q6ZUT3 714 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 TMEM179Q6ZVK1 233 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 MB21D2Q8IYB1 491 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 ENAHQ8N8S7 591 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 NUDT10Q8NFP7 164 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 HSPBAP1Q96EW2 488 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 NUDT11Q96G61 164 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 AJUBAQ96IF1 538 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 JAKMIP1Q96N16 626 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 P2RX7Q99572 595 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 NCAPGQ9BPX3 1015 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 TMEM47Q9BQJ4 181 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CD244Q9BZW8 370 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 ARHGAP39Q9C0H5 1083 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 RPAP3Q9H6T3 665 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 TXNRD2Q9NNW7 524 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 JADE2Q9NQC1 790 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 CTNNA3Q9UI47 895 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 SRPK3Q9UPE1 567 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 TESMINQ9Y4I5 508 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 B3GALT1Q9Y5Z6 326 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 RLFQ13129 1914 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 ZMYM6O95789 1325 aa5.42□□□□□ -1.54
ATPAF1-203ENST00000460928 EYSQ5T1H1 3165 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 hCG_1642624A0A1W2PR95 340 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 LCHNA4D1U4 455 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 MANSC4A6NHS7 340 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 F5H6K3 240 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CXCL11O14625 94 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 IFIT3O14879 490 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 ZNF500O60304 480 aaPredicted RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 KDM1AO60341 852 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC3A2P08195 630 aaKnown RBP5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 NEFHP12036 1026 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 FAHP16930 419 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 VCAM1P19320 739 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CD40P25942 277 aa5.41□□□□□ -1.54
ATPAF1-203ENST00000460928 CTGFP29279 349 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms