RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 SUMF1Q8NBK3 374 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 PLEKHO2Q8TD55 490 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 SPATA17Q96L03 361 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 XYLT2Q9H1B5 865 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 SNX25Q9H3E2 840 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 NME7Q9Y5B8 376 aa12.62□□□□□ -0.39
SOX2-OT-201ENST00000460739 LRRIQ3A6PVS8 624 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 BDNFP23560 247 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 CASP4P49662 377 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 CCR3P51677 355 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 AP3M2P53677 418 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 MYL6P60660 151 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 TNNC1P63316 161 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRPC3Q13507 836 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 GAS6Q14393 721 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 WDR44Q5JSH3 913 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 TTC8Q8TAM2 541 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 HPS4Q9NQG7 708 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 GKN1Q9NS71 199 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 PTPRZ1P23471 2315 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
SOX2-OT-201ENST00000460739 OTOGLQ3ZCN5 2332 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 USP17L7P0C7H9 530 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 GRIK1P39086 918 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 SYKP43405 635 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 NDUFA8P51970 172 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 NRLP54845 237 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 RUNX3Q13761 415 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 CCINQ13939 588 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 PON2Q15165 354 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 FSIP1Q8NA03 581 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 OR6B3Q8NGW1 331 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 RUBCNQ92622 972 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 C8orf48Q96LL4 319 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 SLC22A12Q96S37 553 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 CYP2S1Q96SQ9 504 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 EPC1Q9H2F5 836 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 GCNT4Q9P109 453 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
SOX2-OT-201ENST00000460739 EP300Q09472 2414 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 A8MXQ7 604 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRIM66O15016 1216 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 PHACTR2O75167 634 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 RHOBTB3O94955 611 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 C4BPAP04003 597 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 NR3C1P04150 777 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 CKMP06732 381 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 ANXA13P27216 316 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 CXCL12P48061 93 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 NOP14P78316 857 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 SATB1Q01826 763 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 DPYDQ12882 1025 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 BIRC3Q13489 604 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 ZNF699Q32M78 642 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 CHFRQ96EP1 664 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
SOX2-OT-201ENST00000460739 C2orf78A6NCI8 922 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms