RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 NCKAP1LP55160 1127 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 MYL7Q01449 175 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 GFPT1Q06210 699 aaPredicted RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 BYSLQ13895 437 aaKnown RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 ZNF268Q14587 947 aaPredicted RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 ZNF77Q15935 545 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 DDR2Q16832 855 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 C19orf48Q6RUI8 117 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 TMEM150AQ86TG1 271 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 SPATA2LQ8IUW3 424 aaPredicted RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 SYT12Q8IV01 421 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 ALLCQ8N6M5 410 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 ARL14EPQ8N8R7 260 aaPredicted RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 SH3RF2Q8TEC5 729 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 CYP2S1Q96SQ9 504 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 TMEM206Q9H813 350 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 DDX43Q9NXZ2 648 aaKnown RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 KCND2Q9NZV8 630 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 MMP17Q9ULZ9 603 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 DERAQ9Y315 318 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 MSRB2Q9Y3D2 182 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 PCDHB9Q9Y5E1 797 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 PCDHB6Q9Y5E3 794 aa8.49□□□□□ -1.05
HPS4-207ENST00000459918 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
HPS4-207ENST00000459918 ADAMTS20P59510 1910 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 DMXL2Q8TDJ6 3036 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 ANAPC1Q9H1A4 1944 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 TCRBV21S2A2A0A5A6 115 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 VWA3AA6NCI4 1184 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 H0Y626 953 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PIRO00625 290 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 TNFRSF10BO14763 440 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 ZBTB24O43167 697 aaPredicted RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 AP5Z1O43299 807 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 HUS1O60921 280 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 TRIM16O95361 564 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 KLF8O95600 359 aaPredicted RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 APODP05090 189 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 KRT19P08727 400 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 HMGA1P17096 107 aaKnown RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 HDCP19113 662 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 CYP2F1P24903 491 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 ANXA13P27216 316 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PNPLA4P41247 253 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PTGER3P43115 390 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 EMP3P54852 163 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 RPL6Q02878 288 aaKnown RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 KDSRQ06136 332 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 CRY1Q16526 586 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 EML3Q32P44 896 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 EOGTQ5NDL2 527 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 LRRTM3Q86VH5 581 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 RASSF3Q86WH2 238 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 GPBP1Q86WP2 473 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 DEFB119Q8N690 84 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 SYT2Q8N9I0 419 aaPredicted RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 TXNDC5Q8NBS9 432 aaKnown RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 FBXO18Q8NFZ0 1043 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 RIN3Q8TB24 985 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 SPATA18Q8TC71 538 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 USP33Q8TEY7 942 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 POMGNT1Q8WZA1 660 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 EZH1Q92800 747 aaPredicted RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 SLC22A12Q96S37 553 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 REEP2Q9BRK0 252 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 ASB7Q9H672 318 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PARVGQ9HBI0 331 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 FSCN3Q9NQT6 498 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 EVLQ9UI08 416 aaPredicted RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 CPSF3Q9UKF6 684 aaKnown RBP8.48□□□□□ -1.05
HPS4-207ENST00000459918 WASF3Q9UPY6 502 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 C2CD2Q9Y426 696 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PTPRDP23468 1912 aa8.48□□□□□ -1.05
HPS4-207ENST00000459918 PLXND1Q9Y4D7 1925 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 A0A0B4J269 797 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 C2orf78A6NCI8 922 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 SCAMP3O14828 347 aaKnown RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 TRAK2O60296 914 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 CLSTN1O94985 981 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 ITGB3P05106 788 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 SCP2P22307 547 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 POLR2BP30876 1174 aaKnown RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 ABCD1P33897 745 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 PRPHP41219 470 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 SLC12A3P55017 1021 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 MRPS21P82921 87 aaKnown RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 TFAMQ00059 246 aaKnown RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 IFRD2Q12894 506 aaPredicted RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 USP4Q13107 963 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 RESTQ13127 1097 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 ZNF423Q2M1K9 1284 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 ZC2HC1CQ53FD0 456 aaPredicted RBP8.47□□□□□ -1.05
HPS4-207ENST00000459918 SLFN12LQ6IEE8 588 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 RABEPKQ7Z6M1 372 aa8.47□□□□□ -1.05
HPS4-207ENST00000459918 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms