RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SOX10P56693 466 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 EIF2B5Q13144 721 aaKnown RBP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 HLTFQ14527 1009 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 FAM153CQ494X1 144 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 PLA1AQ53H76 456 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 ZNF362Q5T0B9 420 aaPredicted RBP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 AKNAD1Q5T1N1 836 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 DCAF12L1Q5VU92 463 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 ZNF551Q7Z340 670 aaPredicted RBP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SESTD1Q86VW0 696 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 MICU3Q86XE3 530 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 PRIMA1Q86XR5 153 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SLC15A3Q8IY34 581 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 RAPGEF4Q8WZA2 1011 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 NELL1Q92832 810 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SPSB4Q96A44 273 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 TIFAQ96CG3 184 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 UROC1Q96N76 676 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 NUP62CLQ9H1M0 184 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 DDX21Q9NR30 783 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 ARHGEF3Q9NR81 526 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SEMA4GQ9NTN9 838 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SERTAD4Q9NUC0 356 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 COL20A1Q9P218 1284 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 SH2B3Q9UQQ2 575 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 MRPS17Q9Y2R5 130 aaKnown RBP3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 ENTPD2Q9Y5L3 495 aa3.7□□□□□ -1.82
SCARNA18-201ENST00000459004 IGLV2-14P01704 120 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 FAM163BP0C2L3 166 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 WT1P19544 449 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 KCNA3P22001 575 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 KLRC1P26715 233 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 PTH2RP49190 550 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 NANOS3P60323 173 aaKnown RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 SP2Q02086 613 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 INSCQ1MX18 579 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 ZIK1Q3SY52 487 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 C3orf38Q5JPI3 329 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 TREML2Q5T2D2 321 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 FBXO42Q6P3S6 717 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 ZDHHC24Q6UX98 284 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 MAVSQ7Z434 540 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 WDR53Q7Z5U6 358 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 ADGRG3Q86Y34 549 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 KRT78Q8N1N4 520 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 FAM98AQ8NCA5 519 aaKnown RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 OR56A3Q8NH54 315 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 BPIFB1Q8TDL5 484 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 ATG4AQ8WYN0 398 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 PHKBQ93100 1093 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 PPP2R3CQ969Q6 453 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 CCDC136Q96JN2 1154 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 MSLNLQ96KJ4 702 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 CRAMP1Q96RY5 1269 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 HAPLN3Q96S86 360 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 PPP1R9BQ96SB3 815 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 BTBD1Q9H0C5 482 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 KLK15Q9H2R5 256 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 CXorf36Q9H7Y0 433 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 GLOD4Q9HC38 313 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 RGS17Q9UGC6 210 aaPredicted RBP3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 ST3GAL5Q9UNP4 418 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 PCDHGB6Q9Y5F9 930 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 COX11Q9Y6N1 276 aa3.69□□□□□ -1.82
SCARNA18-201ENST00000459004 LOC102723971A0A1B0GUV8 181 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 A1L4Q6 167 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 FOXN3O00409 490 aaPredicted RBP3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 CCP110O43303 1012 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 PROP1O75360 226 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 RASSF9O75901 435 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 CSF1RP07333 972 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 NDUFB7P17568 137 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 LIPAP38571 399 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 ATXN1P54253 815 aaKnown RBP3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 PRKAG1P54619 331 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 RPS16P62249 146 aaKnown RBP3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 HSP90AB2PQ58FF8 381 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 TSTD2Q5T7W7 516 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 DEPDC1Q5TB30 811 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 ANKRD16Q6P6B7 361 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 RD3Q7Z3Z2 195 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 ARHGEF25Q86VW2 580 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 ABRAQ8N0Z2 381 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 BOLLQ8N9W6 283 aaKnown RBP3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 OSCP1Q8WVF1 389 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 GLG1Q92896 1179 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 SARGQ9BW04 601 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 STK31Q9BXU1 1019 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 PRDM13Q9H4Q3 707 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 CPNE5Q9HCH3 593 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 IL17RBQ9NRM6 502 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 TRMT13Q9NUP7 481 aaKnown RBP3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 ASB6Q9NWX5 421 aa3.68□□□□□ -1.82
SCARNA18-201ENST00000459004 PQBP1O60828 265 aaKnown RBP3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 IL6RP08887 468 aaPredicted RBP3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 EBLN1P0CF75 366 aa3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 TXNP10599 105 aaKnown RBP3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 JUPP14923 745 aa3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 GPD1P21695 349 aa3.67□□□□□ -1.82
SCARNA18-201ENST00000459004 ITPKBP27987 946 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms