RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 CD302Q8IX05 232 aa12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 ELMO3Q96BJ8 720 aa12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 USP32Q8NFA0 1604 aa12.2□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CYB561D2O14569 222 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZBTB39O15060 712 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 H2AFXP16104 143 aaPredicted RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 MYBPC2Q14324 1141 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CNGA3Q16281 694 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 APOBEC3HQ6NTF7 200 aaKnown RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CD274Q9NZQ7 290 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 FRMPD1Q5SYB0 1578 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 PXDNQ92626 1479 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 GLI1P08151 1106 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CXCL8P10145 99 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ALDH1A3P47895 512 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 NUMBP49757 651 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 PTPN11Q06124 597 aaPredicted RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 PGM5Q15124 567 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 RNF180Q86T96 592 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 FBXO36Q8NEA4 188 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ACTL9Q8TC94 416 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CMTM5Q96DZ9 223 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CNPY3Q9BT09 278 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 SHCBP1LQ9BZQ2 653 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 NSMCE4AQ9NXX6 385 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 PSD3Q9NYI0 1048 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 TRAF3IP3Q9Y228 551 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 SH3BP1Q9Y3L3 701 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 INSRRP14616 1297 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ATICP31939 592 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 YAF2Q8IY57 180 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 RXFP2Q8WXD0 754 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 NAF1Q96HR8 494 aaKnown RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 KIAA1683Q9H0B3 1180 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 KCNQ5Q9NR82 932 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 AGLP35573 1532 aa12.19□□□□□ -0.46
SMARCAD1-204ENST00000457823 WNT10BO00744 389 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 DGKIO75912 1065 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ANXA9O76027 345 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SERPIND1P05546 499 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 RGS4P49798 205 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SLC26A2P50443 739 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 DENND5BQ6ZUT9 1274 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 PRUNE1Q86TP1 453 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 KIRREL3Q8IZU9 778 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 OSMRQ99650 979 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 FAM129AQ9BZQ8 928 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 DIP2BQ9P265 1576 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SUPT3HB4E1H0 165 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 EML1O00423 815 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 STX7O15400 261 aaKnown RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SUPT3HO75486 399 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ODC1P11926 461 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 VEGFAP15692 232 aaPredicted RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 PTK6Q13882 451 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ADCK2Q7Z695 626 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 PCYOX1LQ8NBM8 494 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 ZNF606Q8WXB4 792 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 CHCHD3Q9NX63 227 aaKnown RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 CAND2O75155 1236 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 F9P00740 461 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 TRIP10Q15642 601 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 SGO1Q5FBB7 561 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 EME1Q96AY2 570 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 FOPNLQ96NB1 174 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 PPP1R2P1Q96PQ5 205 aa12.18□□□□□ -0.46
SMARCAD1-204ENST00000457823 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms