RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 BDNFP23560 247 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 DDX6P26196 483 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■■□□□ 12.2
VEGFA-210ENST00000457104 ATICP31939 592 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 MTAPQ13126 283 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TRPC3Q13507 836 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TXNDC11Q6PKC3 985 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 VSTM1Q6UX27 236 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TTC8Q8TAM2 541 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 NELL1Q92832 810 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 SPATA17Q96L03 361 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 SLC22A12Q96S37 553 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 CHRDQ9H2X0 955 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 SEMA4AQ9H3S1 761 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 DPEP3Q9H4B8 488 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 GKN1Q9NS71 199 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TDP1Q9NUW8 608 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 UXTQ9UBK9 157 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-210ENST00000457104 NXF1Q9UBU9 619 aaKnown RBP13.22□□□□□ -0.29
VEGFA-210ENST00000457104 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 KIAA1549LQ6ZVL6 1849 aa13.22□□□□□ -0.29
VEGFA-210ENST00000457104 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 PHACTR2O75167 634 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CTHP32929 405 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 AVPR1AP37288 418 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 KPNA1P52294 538 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 AP3M2P53677 418 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CACNA2D1P54289 1103 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CDH8P55286 799 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 USP46P62068 366 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 TNNC1P63316 161 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CYP27A1Q02318 531 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 NCOA4Q13772 614 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 GAS6Q14393 721 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 ZACNQ401N2 412 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 RALGPS2Q86X27 583 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 SYAP1Q96A49 352 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 MSANTD3Q96H12 275 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 SDCBP2Q9H190 292 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 C8orf33Q9H7E9 229 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 PRMT8Q9NR22 394 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-210ENST00000457104 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
VEGFA-210ENST00000457104 GVINP1Q7Z2Y8 2422 aa13.21□□□□□ -0.3
VEGFA-210ENST00000457104 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.3
VEGFA-210ENST00000457104 MYOFQ9NZM1 2061 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-210ENST00000457104 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-210ENST00000457104 TDGF1P13385 188 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 GRIK1P39086 918 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 BIRC3Q13489 604 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF268Q14587 947 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-210ENST00000457104 KCNB1Q14721 858 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 NFIL3Q16649 462 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 TSSK4Q6SA08 328 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 CEP295NLQ96MC4 621 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 TTLL2Q9BWV7 592 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 B3GNT5Q9BYG0 378 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 HPS4Q9NQG7 708 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 THG1LQ9NWX6 298 aaKnown RBP13.2□□□□□ -0.3
VEGFA-210ENST00000457104 EML5Q05BV3 1969 aa13.2□□□□□ -0.3
VEGFA-210ENST00000457104 F8VP50 259 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 CLDN5O00501 218 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 IKBKBO14920 756 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 MAPK13O15264 365 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 MCCD1P59942 119 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ZNF667Q5HYK9 610 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
VEGFA-210ENST00000457104 ZC3H14Q6PJT7 736 aaKnown RBP13.19□□□□□ -0.3
VEGFA-210ENST00000457104 DENND5BQ6ZUT9 1274 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms