RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PLEKHG4BQ96PX9 1271 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 EBF4Q9BQW3 602 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 C20orf27Q9GZN8 174 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 MIS12Q9H081 205 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 S100A14Q9HCY8 104 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 PCDHB2Q9Y5E7 798 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 SNCAIPQ9Y6H5 919 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 NFASCO94856 1347 aa10.79□□□□□ -0.68
CLIP4-208ENST00000456385 IPO5O00410 1097 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 TXNDC9O14530 226 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 UQCRBP14927 111 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 CPOXP36551 454 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PSMC5P62195 406 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 MAP7Q14244 749 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 GRM2Q14416 872 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 R3HDM1Q15032 1099 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 KBTBD12Q3ZCT8 623 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 MMEL1Q495T6 779 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 RALGPS1Q5JS13 557 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 DRICH1Q6PGQ1 229 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 SPOCD1Q6ZMY3 1216 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 SLC26A7Q8TE54 656 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 TMEM174Q8WUU8 243 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PCDH9Q9HC56 1237 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 DDX18Q9NVP1 670 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 NYAP2Q9P242 653 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 DNAJB4Q9UDY4 337 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 FETUBQ9UGM5 382 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 POLIQ9UNA4 740 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PCDHAC2Q9Y5I4 1007 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 VILLO15195 856 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PDE5AO76074 875 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 C6orf222P0C671 652 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 STIP1P31948 543 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 RARRES1P49788 294 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 HSPA2P54652 639 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 TMPRSS15P98073 1019 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PDK3Q15120 406 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 LIN9Q5TKA1 542 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 CIAPIN1Q6FI81 312 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PPIL6Q8IXY8 311 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 NAT8LQ8N9F0 302 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 CCDC124Q96CT7 223 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 TRIM11Q96F44 468 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 RILPQ96NA2 401 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 SRPK1Q96SB4 655 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PCDHGB4Q9UN71 923 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 DRG1Q9Y295 367 aaKnown RBP10.78□□□□□ -0.68
CLIP4-208ENST00000456385 PCDHGB5Q9Y5G0 923 aa10.78□□□□□ -0.68
CLIP4-208ENST00000456385 hCG_1818297A0A087WSY0 165 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 TCRBV9S1A1TA0A576 114 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 DDTLA6NHG4 134 aaPredicted RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 ITGAVP06756 1048 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 FAM163BP0C2L3 166 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 ATP2B4P23634 1241 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 EPHB1P54762 984 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 NOMO3P69849 1222 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 GCNT1Q02742 428 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 SLC18A2Q05940 514 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 DNAL1Q4LDG9 190 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 PLEKHA7Q6IQ23 1121 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 B3GNT9Q6UX72 402 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 RBM44Q6ZP01 1051 aaKnown RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 RBM12BQ8IXT5 1001 aaKnown RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 TEKT3Q9BXF9 490 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 WDR11Q9BZH6 1224 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 SHCBP1LQ9BZQ2 653 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 KLHL4Q9C0H6 718 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 MRPL47Q9HD33 250 aaKnown RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 ZDHHC7Q9NXF8 308 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 ZNRF3Q9ULT6 936 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
CLIP4-208ENST00000456385 FOCADQ5VW36 1801 aa10.77□□□□□ -0.69
CLIP4-208ENST00000456385 IQANK1A0A1B0GTG1 560 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 FKBP6O75344 327 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 AVILO75366 819 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 TPP2P29144 1249 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 RPL22P35268 128 aaKnown RBP10.76□□□□□ -0.69
CLIP4-208ENST00000456385 ELK3P41970 407 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 JAG1P78504 1218 aa10.76□□□□□ -0.69
CLIP4-208ENST00000456385 CCNIQ14094 377 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms