RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 BICD1Q96G01 975 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DDX27Q96GQ7 796 aaKnown RBP10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SMC6Q96SB8 1091 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RIT2Q99578 217 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRABDQ9H4I3 376 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EXOC1LA0A1B0GW35 172 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 A6NJR5 290 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 A8MXQ7 604 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 K7ENM7 598 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SMAPO00193 183 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TM9SF1O15321 606 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CCDC22O60826 627 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PROSCO94903 275 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 LYPLA2O95372 231 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ARIH2O95376 493 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TGDSO95455 350 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ATP5BP06576 529 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 T-ENOLP0DO92 83 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MYCLP12524 364 aaPredicted RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CYP11B1P15538 503 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RAG1P15918 1043 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KLRC2P26717 231 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CCND2P30279 289 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ADSSP30520 456 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PTPN7P35236 360 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 BPIFB4P59827 614 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MCL1Q07820 350 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DYNC1I2Q13409 638 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KRT72Q14CN4 511 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MORF4L2Q15014 288 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PGM5Q15124 567 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMED2Q15363 201 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EFHC2Q5JST6 749 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 C1orf220Q5T0J3 134 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 HHATQ5VTY9 493 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KRT39Q6A163 491 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RHOT1Q8IXI2 618 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CYP4X1Q8N118 509 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EXD1Q8NHP7 514 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 COPS5Q92905 334 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 BADQ92934 168 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 FAM136AQ96C01 138 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 VCPIP1Q96JH7 1222 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 KREMEN1Q96MU8 473 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TEKT3Q9BXF9 490 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 RGL1Q9NZL6 768 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 PDP2Q9P2J9 529 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 NKX1-2Q9UD57 310 aaPredicted RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 GGT7Q9UJ14 662 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 TRIM33Q9UPN9 1127 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 EXOC7Q9UPT5 735 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 SHOC2Q9UQ13 582 aa10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 DRG1Q9Y295 367 aaKnown RBP10.53□□□□□ -0.72
CHCHD4P3-201ENST00000455954 ARID2Q68CP9 1835 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GSTTP1A0A1W2PQM5 241 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MAGEA13PA6NCF6 341 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PDLIM1O00151 329 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TYROBPO43914 113 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GAS7O60861 476 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SKAP2O75563 359 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MYL3P08590 195 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PTDSS1P48651 473 aaKnown RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RAB27AP51159 221 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GTF2BQ00403 316 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GCNT1Q02742 428 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CDK18Q07002 472 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LIN9Q5TKA1 542 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DAB2IPQ5VWQ8 1189 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MTHFD1LQ6UB35 978 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C4orf50Q6ZRC1 276 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NIPA1Q7RTP0 329 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NLRP9Q7RTR0 991 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PCGF5Q86SE9 256 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TPH2Q8IWU9 490 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PPFIBP2Q8ND30 876 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TEKT4Q8WW24 435 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IFT43Q96FT9 208 aa10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RBM41Q96IZ5 413 aaKnown RBP10.52□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NR1H4Q96RI1 486 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms