RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 ZNF233A6NK53 670 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 GDF9O60383 454 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 GALK1P51570 392 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 PSMC1P62191 440 aaKnown RBP20.06■□□□□ 0.8
COL20A1-204ENST00000455906 MYO1EQ12965 1108 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 GAB3Q8WWW8 586 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 EZH1Q92800 747 aaPredicted RBP20.06■□□□□ 0.8
COL20A1-204ENST00000455906 SYT15Q9BQS2 421 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 TRIM9Q9C026 710 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 ECT2Q9H8V3 914 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 CRTAC1Q9NQ79 661 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
COL20A1-204ENST00000455906 TRAV19A0A0A6YYK7 116 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 C2orf78A6NCI8 922 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 STX6O43752 255 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 ATG13O75143 517 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 TNNC2P02585 160 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 CKMP06732 381 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 USP17L7P0C7H9 530 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 DRD1P21728 446 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 AMPD2Q01433 879 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 SURF1Q15526 300 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 DUOXA2Q1HG44 320 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 EML3Q32P44 896 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 C4orf50Q6ZRC1 276 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 EPM2AIP1Q7L775 607 aaPredicted RBP20.05■□□□□ 0.8
COL20A1-204ENST00000455906 CPA6Q8N4T0 437 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 ARL14EPQ8N8R7 260 aaPredicted RBP20.05■□□□□ 0.8
COL20A1-204ENST00000455906 MYLPFQ96A32 169 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 P2RY13Q9BPV8 354 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 DUS2Q9NX74 493 aaKnown RBP20.05■□□□□ 0.8
COL20A1-204ENST00000455906 CDH9Q9ULB4 789 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 SLC8A2Q9UPR5 921 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 WNT6Q9Y6F9 365 aa20.05■□□□□ 0.8
COL20A1-204ENST00000455906 KMT2BQ9UMN6 2715 aaPredicted RBP20.05■□□□□ 0.8
COL20A1-204ENST00000455906 EIF3DO15371 548 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL20A1-204ENST00000455906 RPP40O75818 363 aaKnown RBP20.04■□□□□ 0.8
COL20A1-204ENST00000455906 WARSP23381 471 aaKnown RBP20.04■□□□□ 0.8
COL20A1-204ENST00000455906 RAP1GAPP47736 663 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 STK38Q15208 465 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 VSTM1Q6UX27 236 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 KBTBD6Q86V97 674 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 WDR49Q8IV35 697 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 SPATA17Q96L03 361 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 CNTNAP3BQ96NU0 1288 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 CNTNAP3Q9BZ76 1288 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 MAGEC2Q9UBF1 373 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-204ENST00000455906 NME7Q9Y5B8 376 aa20.04■□□□□ 0.8
COL20A1-204ENST00000455906 AXIN1O15169 862 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 TGFB1I1O43294 461 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 TCF3P15923 654 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 BDNFP23560 247 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 IFNAR2P48551 515 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 USP46P62068 366 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 ZXDBP98169 803 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 FBXO43Q4G163 708 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 CNNM4Q6P4Q7 775 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 TRAPPC11Q7Z392 1133 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 CACNA2D4Q7Z3S7 1137 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 CAMKK1Q8N5S9 505 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 FSIP1Q8NA03 581 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 TTC16Q8NEE8 873 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 ZNF507Q8TCN5 953 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 SH3RF2Q8TEC5 729 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 ATP2A3Q93084 1043 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 LOXL4Q96JB6 756 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 LRRC27Q9C0I9 530 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 ARRDC1-AS1Q9H2J1 176 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 KIAA1586Q9HCI6 787 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 ARHGAP26Q9UNA1 814 aa20.03■□□□□ 0.8
COL20A1-204ENST00000455906 R3HCC1Q9Y3T6 440 aaKnown RBP20.03■□□□□ 0.8
COL20A1-204ENST00000455906 SPTLC2O15270 562 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 FOXD2O60548 495 aaPredicted RBP20.02■□□□□ 0.8
COL20A1-204ENST00000455906 PPP6R2O75170 966 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 EPN2O95208 641 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 CST3P01034 146 aaPredicted RBP20.02■□□□□ 0.8
COL20A1-204ENST00000455906 ADRB1P08588 477 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 PDGFRBP09619 1106 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 PPM1JQ5JR12 505 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 RPLP0P6Q8NHW5 317 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 CD101Q93033 1021 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 PCED1BQ96HM7 432 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 CEP295NLQ96MC4 621 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 HHIPQ96QV1 700 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 MRPL45Q9BRJ2 306 aaKnown RBP20.02■□□□□ 0.8
COL20A1-204ENST00000455906 LINC00597Q9H2U6 94 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 AGPAT3Q9NRZ7 376 aa20.02■□□□□ 0.8
COL20A1-204ENST00000455906 MAP1BP46821 2468 aaKnown RBP20.01■□□□□ 0.79
COL20A1-204ENST00000455906 AKAP3O75969 853 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 CCDC192P0DO97 292 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 HDCP19113 662 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 GRIK1P39086 918 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 ASIC1P78348 528 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 EHHADHQ08426 723 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 KCNB1Q14721 858 aa20.01■□□□□ 0.79
COL20A1-204ENST00000455906 SF3A2Q15428 464 aaKnown RBP20.01■□□□□ 0.79
COL20A1-204ENST00000455906 MAPRE1Q15691 268 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms