RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 XKR9Q5GH70 373 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PPIL6Q8IXY8 311 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FAM81AQ8TBF8 368 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FAF2Q96CS3 445 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SAYSD1Q9NPB0 183 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RGS18Q9NS28 235 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PI4KBQ9UBF8 816 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RAPGEFL1Q9UHV5 662 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PTPN22Q9Y2R2 807 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TRDMT1O14717 391 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ATF6P18850 670 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MAPK7Q13164 816 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 KCTD2Q14681 263 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DDR2Q16832 855 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MTERF2Q49AM1 385 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RNF219Q5W0B1 726 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RORBQ92753 470 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SPATA5L1Q9BVQ7 753 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 NOD2Q9HC29 1040 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PNPLA3Q9NST1 481 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FAM153AQ9UHL3 310 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RAB21Q9UL25 225 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ADGRF5Q8IZF2 1346 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 A0A0D9SFI3 127 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SFI1A8K8P3 1242 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 HLA-DPA1P20036 260 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 IRAK1P51617 712 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ABI1Q8IZP0 508 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ABHD8Q96I13 439 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CALN1Q9BXU9 219 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 AVENQ9NQS1 362 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FETUBQ9UGM5 382 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 C3orf18Q9UK00 162 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MKL2Q9ULH7 1088 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FGAP02671 866 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 RPL5P46777 297 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 BNIP2Q12982 314 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TCIRG1Q13488 830 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 FRG1Q14331 258 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 CDH24Q86UP0 819 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ARHGEF19Q8IW93 802 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ZC3H7BQ9UGR2 993 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 DMTF1Q9Y222 760 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 KNDC1Q76NI1 1749 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 UBE2QL1A1L167 161 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 VIL1P09327 827 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 RCVRNP35243 200 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 PRKAA1Q13131 559 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TRAPPC3LQ5T215 181 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TIGD7Q6NT04 549 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 SRFBP1Q8NEF9 429 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 CNDP1Q96KN2 507 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 CLIC6Q96NY7 704 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 PKD2L1Q9P0L9 805 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TNPO3Q9Y5L0 923 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 FER1L4A9Z1Z3 1794 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ERBB2P04626 1255 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 OSBPP22059 807 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 PCSK1P29120 753 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 GP5P40197 560 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 PLA2G4AP47712 749 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF699Q32M78 642 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 FBXO42Q6P3S6 717 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MZT2AQ6P582 158 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 EXOC3L1Q86VI1 746 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 NBPF15Q8N660 670 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 DNAJB8Q8NHS0 232 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 COQ7Q99807 217 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TMX1Q9H3N1 280 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ZBTB3Q9H5J0 574 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 CD320Q9NPF0 282 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 KMT5AQ9NQR1 393 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 C15orf41Q9Y2V0 281 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 A0A088AWK7 358 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MAGEB3O15480 346 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MED24O75448 989 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF10P21506 573 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 CYP2J2P51589 502 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ARPC4P59998 168 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 DAB2P98082 770 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 POLA2Q14181 598 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 INO80DQ53TQ3 878 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TFDP3Q5H9I0 405 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 C17orf50Q8WW18 174 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 KLHL28Q9NXS3 571 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TRIM10Q9UDY6 481 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MAD2L2Q9UI95 211 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 TMCC3Q9ULS5 477 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 THRAP3Q9Y2W1 955 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ZNFX1Q9P2E3 1918 aaKnown RBP5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MON2Q7Z3U7 1717 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 NFIBO00712 420 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 ARIH2O95376 493 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 MYL12AP19105 171 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 AKT1P31749 480 aa5.4□□□□□ -1.54
CSMD3-204ENST00000455883 NPTX2P47972 431 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms