RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TGIF2Q9GZN2 237 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 GBP3Q9H0R5 595 aa5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 NOP58Q9Y2X3 529 aaKnown RBP5.95□□□□□ -1.46
SBDSP1-204ENST00000453858 CSPG4Q6UVK1 2322 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 MXRA5Q9NR99 2828 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 TGP01266 2768 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 ESYT2A0FGR8 921 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 K7ENP7 123 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 STAM2O75886 525 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 EGFP01133 1207 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 HOXA13P31271 388 aaPredicted RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 EIF4A3P38919 411 aaKnown RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 SCRN1Q12765 414 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 CAMK2GQ13555 558 aaPredicted RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 DMC1Q14565 340 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 TBC1D25Q3MII6 688 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 GNPTABQ3T906 1256 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 AXDND1Q5T1B0 1012 aaPredicted RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 LIN9Q5TKA1 542 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 FDX2Q6P4F2 183 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 INO80CQ6PI98 192 aaPredicted RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 DHRS13Q6UX07 377 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 Q6ZS46 218 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 RTL10Q7L3V2 364 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 ARMCX6Q7L4S7 300 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 PLPPR4Q7Z2D5 763 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 ARID3BQ8IVW6 561 aaPredicted RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 MMP21Q8N119 569 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 SLC7A14Q8TBB6 771 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 STK35Q8TDR2 534 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 UBASH3BQ8TF42 649 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 RHOVQ96L33 236 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 CNOT6LQ96LI5 555 aaKnown RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 PPP1R16BQ96T49 567 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 CDC6Q99741 560 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 TPSD1Q9BZJ3 242 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 UBA5Q9GZZ9 404 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 PRDM16Q9HAZ2 1276 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 KBTBD4Q9NVX7 518 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 RTEL1Q9NZ71 1219 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 INPP5FQ9Y2H2 1132 aa5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 MRPL11Q9Y3B7 192 aaKnown RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 ATXN2Q99700 1313 aaKnown RBP5.94□□□□□ -1.46
SBDSP1-204ENST00000453858 SDK2Q58EX2 2172 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 OTOL1A6NHN0 477 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 VTNP04004 478 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 SYPP08247 313 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF883P0CG24 379 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 TFE3P19532 575 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 ERCC5P28715 1186 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 CLDN6P56747 220 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 TNK2Q07912 1038 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 DSC1Q08554 894 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 TARDBPQ13148 414 aaKnown RBP eCLIP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 USP41Q3LFD5 358 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 C1QL3Q5VWW1 255 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 LYSMD4Q5XG99 296 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 PRSS55Q6UWB4 352 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 MRPL10Q7Z7H8 261 aaKnown RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 LINC01465Q8N7H1 131 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 ZNF248Q8NDW4 579 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 MDGA1Q8NFP4 955 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 LNX1Q8TBB1 728 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 GRIN3AQ8TCU5 1115 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 SSH3Q8TE77 659 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 RLN3Q8WXF3 142 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 ZFYVE19Q96K21 471 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 IL21RQ9HBE5 538 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 DACT1Q9NYF0 836 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 PRG3Q9Y2Y8 225 aaPredicted RBP5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 ACANP16112 2415 aa5.93□□□□□ -1.46
SBDSP1-204ENST00000453858 MYLKQ15746 1914 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 ANO9A1A5B4 782 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 ARHGEF37A1IGU5 675 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 TNFSF14O43557 240 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 PPP1R11O60927 126 aaPredicted RBP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 PF4P02776 101 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 RNF224P0DH78 156 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 TOP1P11387 765 aaKnown RBP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 HNRNPLP14866 589 aaKnown RBP eCLIP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 DARSP14868 501 aaKnown RBP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 PTPN2P17706 415 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 FGFR4P22455 802 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 ACTN2P35609 894 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 SOX4Q06945 474 aaPredicted RBP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 GRSF1Q12849 480 aaKnown RBP eCLIP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 RAB33AQ14088 237 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 CDC37Q16543 378 aaPredicted RBP5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 QRICH1Q2TAL8 776 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 SNAP47Q5SQN1 464 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 HDXQ7Z353 690 aa5.92□□□□□ -1.46
SBDSP1-204ENST00000453858 CD163Q86VB7 1156 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms