RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 POU5F2Q8N7G0 328 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GIPC2Q8TF65 315 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GPATCH1Q9BRR8 931 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 PLVAPQ9BX97 442 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 NDEL1Q9GZM8 345 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SAYSD1Q9NPB0 183 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 LRRC4BQ9NT99 713 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SLC38A7Q9NVC3 462 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 SLC17A7Q9P2U7 560 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 DNAJC12Q9UKB3 198 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SOX13Q9UN79 622 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
LSM5-208ENST00000450169 CRTAMO95727 393 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FTLP02792 175 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 FAM58BPP0C7Q3 252 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 THRAP10827 490 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SLC5A1P13866 664 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FGFR2P21802 821 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CDH3P22223 829 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 NAPAP54920 295 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 GPC5P78333 572 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 TAGLNQ01995 201 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 RABGAP1LQ5R372 815 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CENPUQ71F23 418 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 ANKS1BQ7Z6G8 1248 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 IFNL2Q8IZJ0 200 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SLC7A5P1Q8MH63 180 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SDR16C5Q8N3Y7 309 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CCDC89Q8N998 374 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FOXP3Q9BZS1 431 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 C12orf65Q9H3J6 166 aaKnown RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 SMYD3Q9H7B4 428 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 VPS37BQ9H9H4 285 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 PPCSQ9HAB8 311 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 ATAD3AQ9NVI7 634 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CHORDC1Q9UHD1 332 aaPredicted RBP9.01□□□□□ -0.97
LSM5-208ENST00000450169 SLC24A2Q9UI40 661 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 CCPG1Q9ULG6 757 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 RAB26Q9ULW5 256 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 PADI4Q9UM07 663 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.01□□□□□ -0.97
LSM5-208ENST00000450169 MAD1L1Q9Y6D9 718 aa9.01□□□□□ -0.97
LSM5-208ENST00000450169 USP17L5A8MUK1 530 aa9□□□□□ -0.97
LSM5-208ENST00000450169 MEI4A8MW99 385 aa9□□□□□ -0.97
LSM5-208ENST00000450169 K7EPI3 171 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CCNT2O60583 730 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 CSDE1O75534 798 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 STAMBPO95630 424 aa9□□□□□ -0.97
LSM5-208ENST00000450169 C6orf222P0C671 652 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 POLR2MP0CAP2 368 aa9□□□□□ -0.97
LSM5-208ENST00000450169 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 CPOXP36551 454 aa9□□□□□ -0.97
LSM5-208ENST00000450169 IL6STP40189 918 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 ALDH1A3P47895 512 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CREB5Q02930 508 aa9□□□□□ -0.97
LSM5-208ENST00000450169 ZBTB17Q13105 803 aa9□□□□□ -0.97
LSM5-208ENST00000450169 TBCCQ15814 346 aa9□□□□□ -0.97
LSM5-208ENST00000450169 ECM1Q16610 540 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
LSM5-208ENST00000450169 AMIGO2Q86SJ2 522 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CPNE8Q86YQ8 564 aa9□□□□□ -0.97
LSM5-208ENST00000450169 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 DDHD1Q8NEL9 900 aa9□□□□□ -0.97
LSM5-208ENST00000450169 RAB3IL1Q8TBN0 382 aa9□□□□□ -0.97
LSM5-208ENST00000450169 USP6NLQ92738 828 aa9□□□□□ -0.97
LSM5-208ENST00000450169 BORCS5Q969J3 196 aa9□□□□□ -0.97
LSM5-208ENST00000450169 HAUS8Q9BT25 410 aa9□□□□□ -0.97
LSM5-208ENST00000450169 HGH1Q9BTY7 390 aa9□□□□□ -0.97
LSM5-208ENST00000450169 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
LSM5-208ENST00000450169 OSBPL10Q9BXB5 764 aa9□□□□□ -0.97
LSM5-208ENST00000450169 GPR88Q9GZN0 384 aa9□□□□□ -0.97
LSM5-208ENST00000450169 PSTPIP2Q9H939 334 aa9□□□□□ -0.97
LSM5-208ENST00000450169 ZNF287Q9HBT7 754 aa9□□□□□ -0.97
LSM5-208ENST00000450169 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
LSM5-208ENST00000450169 TIMM22Q9Y584 194 aa9□□□□□ -0.97
LSM5-208ENST00000450169 AP4B1Q9Y6B7 739 aa9□□□□□ -0.97
LSM5-208ENST00000450169 COL1A1P02452 1464 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 IQCA1LA6NCM1 817 aa9□□□□□ -0.97
LSM5-208ENST00000450169 TSPY2A6NKD2 308 aa9□□□□□ -0.97
LSM5-208ENST00000450169 SOBPA7XYQ1 873 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CYTH3O43739 400 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CNOT3O75175 753 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 BAIAP3O94812 1187 aa9□□□□□ -0.97
LSM5-208ENST00000450169 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
LSM5-208ENST00000450169 CIITAP33076 1130 aa9□□□□□ -0.97
LSM5-208ENST00000450169 PDIA2Q13087 525 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 ELOAQ14241 798 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 GK3PQ14409 553 aa9□□□□□ -0.97
LSM5-208ENST00000450169 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.972e-6■■■■■ 33.5
LSM5-208ENST00000450169 SLC35G1Q2M3R5 365 aa9□□□□□ -0.97
LSM5-208ENST00000450169 DCAF6Q58WW2 860 aa9□□□□□ -0.97
LSM5-208ENST00000450169 NIPAL1Q6NVV3 410 aa9□□□□□ -0.97
LSM5-208ENST00000450169 RWDD4Q6NW29 188 aaKnown RBP9□□□□□ -0.97
LSM5-208ENST00000450169 NLRP10Q86W26 655 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CHSY1Q86X52 802 aa9□□□□□ -0.97
LSM5-208ENST00000450169 CENPSQ8N2Z9 138 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms