RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.33
OTUB1-204ENST00000447683 ADPGKQ9BRR6 497 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 FRMD8P1Q9BZ68 369 aaPredicted RBP17.12■□□□□ 0.33
OTUB1-204ENST00000447683 SYNCQ9H7C4 482 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 INTS9Q9NV88 658 aaKnown RBP17.12■□□□□ 0.33
OTUB1-204ENST00000447683 LGALS13Q9UHV8 139 aa17.12■□□□□ 0.33
OTUB1-204ENST00000447683 M0QYV0 167 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 ZSCAN5DPP0CG00 497 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 KDELR1P24390 212 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 GRB14Q14449 540 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
OTUB1-204ENST00000447683 BBS12Q6ZW61 710 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 EMC1Q8N766 993 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
OTUB1-204ENST00000447683 MAML3Q96JK9 1138 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 PCDH9Q9HC56 1237 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 KIAA1257Q9ULG3 409 aa17.11■□□□□ 0.33
OTUB1-204ENST00000447683 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
OTUB1-204ENST00000447683 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 ETS1P14921 441 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 MAGEA4P43358 317 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 STAT4Q14765 748 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 CCDC38Q502W7 563 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 GPR142Q7Z601 462 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 TTC13Q8NBP0 860 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
OTUB1-204ENST00000447683 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 HEXIM2Q96MH2 286 aaKnown RBP17.1■□□□□ 0.33
OTUB1-204ENST00000447683 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 NDC80O14777 642 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 NDST1P52848 882 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 GPS1Q13098 491 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 RNASEH2BQ5TBB1 312 aaKnown RBP17.1■□□□□ 0.33
OTUB1-204ENST00000447683 LCLAT1Q6UWP7 414 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 EURLQ9NYK6 297 aa17.1■□□□□ 0.33
OTUB1-204ENST00000447683 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CYP3A5P20815 502 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CPLX4Q7Z7G2 160 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
OTUB1-204ENST00000447683 TMEM121Q9BTD3 319 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 ABHD16BQ9H3Z7 469 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CTNNAL1Q9UBT7 734 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CST8O60676 142 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CDH16O75309 829 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 MIPP30301 263 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 DGKDQ16760 1214 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 KCNT1Q5JUK3 1230 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 GKAP1Q5VSY0 366 aaPredicted RBP17.09■□□□□ 0.33
OTUB1-204ENST00000447683 IQSEC1Q6DN90 963 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CACNA2D3Q8IZS8 1091 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 OR6J1Q8NGC5 347 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 ACTL9Q8TC94 416 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 KIF12Q96FN5 646 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 CCDC77Q9BR77 488 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 ADAMTS10Q9H324 1103 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 PLEKHA5Q9HAU0 1116 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 SHOC2Q9UQ13 582 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 DERAQ9Y315 318 aa17.09■□□□□ 0.33
OTUB1-204ENST00000447683 PDCD11Q14690 1871 aaKnown RBP17.08■□□□□ 0.33
OTUB1-204ENST00000447683 RNF8O76064 485 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 TRUB2O95900 331 aaKnown RBP17.08■□□□□ 0.33
OTUB1-204ENST00000447683 PECAM1P16284 738 aaPredicted RBP17.08■□□□□ 0.33
OTUB1-204ENST00000447683 PCK1P35558 622 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 OTUD4Q01804 1114 aaKnown RBP17.08■□□□□ 0.33
OTUB1-204ENST00000447683 IFT88Q13099 833 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 ACVR2BQ13705 512 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 UBA3Q8TBC4 463 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 TTC25Q96NG3 672 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 PRMT1Q99873 361 aaKnown RBP17.08■□□□□ 0.33
OTUB1-204ENST00000447683 TINF2Q9BSI4 451 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 SAYSD1Q9NPB0 183 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.33
OTUB1-204ENST00000447683 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 SGK1O00141 431 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 PFKMP08237 780 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.32
OTUB1-204ENST00000447683 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 STILQ15468 1287 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 RIBC1Q8N443 379 aaPredicted RBP17.08■□□□□ 0.32
OTUB1-204ENST00000447683 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 MIS12Q9H081 205 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 USP18Q9UMW8 372 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 NAALADL1Q9UQQ1 740 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 ZNF236Q9UL36 1845 aa17.08■□□□□ 0.32
OTUB1-204ENST00000447683 ENDOD1O94919 500 aa17.07■□□□□ 0.32
OTUB1-204ENST00000447683 CD48P09326 243 aa17.07■□□□□ 0.32
OTUB1-204ENST00000447683 CREB1P16220 341 aa17.07■□□□□ 0.32
OTUB1-204ENST00000447683 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
OTUB1-204ENST00000447683 FAM102AQ5T9C2 384 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms