RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 PDE11AQ9HCR9 933 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
SSR4-205ENST00000447375 LAMA5O15230 3695 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 AKAP13Q12802 2813 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 ADAMTS20P59510 1910 aa13.39□□□□□ -0.27
SSR4-205ENST00000447375 GCN1Q92616 2671 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 I3L4J1 428 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 CDX4O14627 284 aaPredicted RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 SYN3O14994 580 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 KHNYNO15037 678 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 ATG13O75143 517 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 SEC24AO95486 1093 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 ATF2P15336 505 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 CYP2J2P51589 502 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 ARPP19P56211 112 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 LILRA4P59901 499 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 TEAD2Q15562 447 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 SNRNP35Q16560 246 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 UAP1L1Q3KQV9 507 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 CAMKK1Q8N5S9 505 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
SSR4-205ENST00000447375 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 GTSE1Q9NYZ3 720 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 TRAF3IP3Q9Y228 551 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 INSL5Q9Y5Q6 135 aa13.38□□□□□ -0.27
SSR4-205ENST00000447375 M0QZQ0 153 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 PPEF2O14830 753 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 DCLK1O15075 740 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 MCM4P33991 863 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
SSR4-205ENST00000447375 NFIL3Q16649 462 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 ZNF658Q5TYW1 1059 aaPredicted RBP13.37□□□□□ -0.27
SSR4-205ENST00000447375 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
SSR4-205ENST00000447375 ERCC4Q92889 916 aaPredicted RBP13.37□□□□□ -0.27
SSR4-205ENST00000447375 SLC32A1Q9H598 525 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
SSR4-205ENST00000447375 CALUO43852 315 aaPredicted RBP13.36□□□□□ -0.27
SSR4-205ENST00000447375 EXOC3O60645 756 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 NR3C1P04150 777 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 CAPNS1P04632 268 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 PSMD6Q15008 389 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 DUOXA2Q1HG44 320 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 SMYD4Q8IYR2 804 aaPredicted RBP13.36□□□□□ -0.27
SSR4-205ENST00000447375 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 CEP72Q9P209 647 aa13.36□□□□□ -0.27
SSR4-205ENST00000447375 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
SSR4-205ENST00000447375 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 H7C4K7 107 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 OAZ2O95190 189 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
SSR4-205ENST00000447375 PRCPP42785 496 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 EPHA5P54756 1037 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 CLDN10P78369 228 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 TWF1Q12792 350 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 OR5B17Q8NGF7 314 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
SSR4-205ENST00000447375 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 MKNK1Q9BUB5 465 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
SSR4-205ENST00000447375 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
SSR4-205ENST00000447375 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 ITGA11Q9UKX5 1188 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
SSR4-205ENST00000447375 TSC2P49815 1807 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 SPAARA0A1B0GVQ0 90 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 FAM221BA6H8Z2 402 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 PATE3B3GLJ2 98 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms