RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GRIK1P39086 918 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 SPIRE1Q08AE8 756 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 TRAF1Q13077 416 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 PSMD5Q16401 504 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 SGO2Q562F6 1265 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 SMG8Q8ND04 991 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 TTC8Q8TAM2 541 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 COLEC11Q9BWP8 271 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ANO2Q9NQ90 1003 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 PIN4Q9Y237 131 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 F8P00451 2351 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 CEP192Q8TEP8 1941 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 NUP210Q8TEM1 1887 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 TLN1Q9Y490 2541 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 METTL12A8MUP2 240 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 SUV39H1O43463 412 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 EGFP01133 1207 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 DRD2P14416 443 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 ELAVL4P26378 380 aaKnown RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 MAP4P27816 1152 aaKnown RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 P2RY2P41231 377 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 EPHA5P54756 1037 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 TNK2Q07912 1038 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 GRSF1Q12849 480 aaKnown RBP eCLIP3.65□□□□□ -1.82
PMS1-215ENST00000447232 ITGB3BPQ13352 177 aaPredicted RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 RTP5Q14D33 572 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 ALX1Q15699 326 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 PREPLQ4J6C6 727 aaPredicted RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 ARHGAP29Q52LW3 1261 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 EXOSC6Q5RKV6 272 aaKnown RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 UBXN11Q5T124 520 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 LYSMD4Q5XG99 296 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 HIST2H2BCQ6DN03 193 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 EFCAB12Q6NXP0 572 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 USP17L6PQ6QN14 398 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 ATG14Q6ZNE5 492 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 DBX2Q6ZNG2 339 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 ARMCX6Q7L4S7 300 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 RABEPKQ7Z6M1 372 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 YAF2Q8IY57 180 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 LRRC71Q8N4P6 559 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 MDGA1Q8NFP4 955 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 EZH1Q92800 747 aaPredicted RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 FGF11Q92914 225 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 ZFYVE19Q96K21 471 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 GAD1Q99259 594 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 CORO1BQ9BR76 489 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 TTPALQ9BTX7 342 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 LY9Q9HBG7 655 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 KCNH7Q9NS40 1196 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 TOMM22Q9NS69 142 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 MIOSQ9NXC5 875 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 MYH9P35579 1960 aaKnown RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 CENPEQ02224 2701 aa3.65□□□□□ -1.82
PMS1-215ENST00000447232 BAZ2BQ9UIF8 2168 aaKnown RBP3.65□□□□□ -1.82
PMS1-215ENST00000447232 SF3B1O75533 1304 aaKnown RBP eCLIP3.65□□□□□ -1.835e-8■■■■■ 189.5
PMS1-215ENST00000447232 ARL5CA6NH57 179 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 WDR64B1ANS9 1081 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 SYPP08247 313 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 MYF5P13349 255 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 SFPQP23246 707 aaKnown RBP eCLIP3.65□□□□□ -1.83
PMS1-215ENST00000447232 TMOD1P28289 359 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 OR1D2P34982 312 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 SEMG2Q02383 582 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 ITPRIPL2Q3MIP1 535 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 FBXO43Q4G163 708 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 FAM160B1Q5W0V3 765 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 PDZD4Q76G19 769 aaPredicted RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 ERICH1Q86X53 443 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 GSTCDQ8NEC7 633 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 TSTD1Q8NFU3 115 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 RPLP0P6Q8NHW5 317 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 GCOM2Q9BZD3 368 aaPredicted RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 NRSN2Q9GZP1 204 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 ZNF768Q9H5H4 540 aaKnown RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 RIOX1Q9H6W3 641 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 FBRSL1Q9HCM7 1045 aaKnown RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 CYP4F12Q9HCS2 524 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 UBN1Q9NPG3 1134 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 ZNF302Q9NR11 478 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 AGPAT5Q9NUQ2 364 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 CEP131Q9UPN4 1083 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 HEMK1Q9Y5R4 338 aaPredicted RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 CABIN1Q9Y6J0 2220 aa3.65□□□□□ -1.83
PMS1-215ENST00000447232 SPENQ96T58 3664 aaKnown RBP3.65□□□□□ -1.83
PMS1-215ENST00000447232 KLRF2D3W0D1 207 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 IPO8O15397 1037 aaKnown RBP3.64□□□□□ -1.83
PMS1-215ENST00000447232 CYTH3O43739 400 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 ABL1P00519 1130 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 PCP11498 1178 aaKnown RBP3.64□□□□□ -1.83
PMS1-215ENST00000447232 DRD1P21728 446 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 SCNN1GP51170 649 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 IRAK1P51617 712 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 UCNP55089 124 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 TMPRSS3P57727 454 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 NFATC3Q12968 1075 aa3.64□□□□□ -1.83
PMS1-215ENST00000447232 ZNF211Q13398 564 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms