RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 NIPA2Q8N8Q9 360 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 HSPH1Q92598 858 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 MIS12Q9H081 205 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 SNX25Q9H3E2 840 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 XPNPEP3Q9NQH7 507 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 ST3GAL5Q9UNP4 418 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 PIRO00625 290 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 AOC2O75106 756 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 PPFIA2O75334 1257 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 MYZAPP0CAP1 466 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 CCDC130P13994 396 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 ELNP15502 786 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 PDGFRAP16234 1089 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 IL1R2P27930 398 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 CCND3P30281 292 aaPredicted RBP10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 GBP1P32455 592 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 GABRB2P47870 512 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 TFDP3Q5H9I0 405 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 SH3PXD2AQ5TCZ1 1133 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 TTC19Q6DKK2 380 aaPredicted RBP10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 TTC30AQ86WT1 665 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 KCTD6Q8NC69 237 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 UHMK1Q8TAS1 419 aaKnown RBP10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 ART4Q93070 314 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 WNT8BQ93098 351 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 MCRS1Q96EZ8 462 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 PIWIL1Q96J94 861 aaKnown RBP10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 GPBP1L1Q9HC44 474 aaPredicted RBP10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 CACNG4Q9UBN1 327 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 ZNF148Q9UQR1 794 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 TRPV2Q9Y5S1 764 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.81
COL6A4P1-201ENST00000446690 H0YGN5 161 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SEPT4O43236 478 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 HUS1O60921 280 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ASGR1P07306 291 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 KRT7P08729 469 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 FGFR1P11362 822 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ATF2P15336 505 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 KCNE1P15382 129 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 MIPP30301 263 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 HOXC8P31273 242 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 THPOP40225 353 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 TAF6P49848 677 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SLC25A11Q02978 314 aaKnown RBP10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ZNF844Q08AG5 666 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 STILQ15468 1287 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 TAF5Q15542 800 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 KCNA10Q16322 511 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 LRIG3Q6UXM1 1119 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ZNF560Q96MR9 790 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 DNAJC17Q9NVM6 304 aaKnown RBP10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ASNSD1Q9NWL6 643 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 DNPEPQ9ULA0 475 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 NFS1Q9Y697 457 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 TRPM7Q96QT4 1865 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 hCG_1818297A0A087WSY0 165 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 CHRNA1P02708 482 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 GPD1P21695 349 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 CDKN2BP42772 138 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ITGA8P53708 1063 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 COPS2P61201 443 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ATP11AP98196 1134 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 CAP1Q01518 475 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 BYSLQ13895 437 aaKnown RBP10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 DENND2CQ68D51 928 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SMYD5Q6GMV2 418 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 RNF169Q8NCN4 708 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SLCO2A1Q92959 643 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 LPPQ93052 612 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SNF8Q96H20 258 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 CALN1Q9BXU9 219 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 B3GNT5Q9BYG0 378 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 RAB6CQ9H0N0 254 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SEMA4AQ9H3S1 761 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 PSD3Q9NYI0 1048 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 ANAPC5Q9UJX4 755 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 USP18Q9UMW8 372 aa10.01□□□□□ -0.81
COL6A4P1-201ENST00000446690 SMIM23A6NLE4 172 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 LIASO43766 372 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 ALDH1A1P00352 501 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 SHBGP04278 402 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 CD48P09326 243 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 LCP1P13796 627 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
COL6A4P1-201ENST00000446690 ITIH2P19823 946 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 KDELR1P24390 212 aa10□□□□□ -0.81
COL6A4P1-201ENST00000446690 IGFBP6P24592 240 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms