RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 STAT5BP51692 787 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 GABPB1Q06547 395 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 TRAF1Q13077 416 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 NMIQ13287 307 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 CAMK2DQ13557 499 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZNF805Q5CZA5 627 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 GLRA4Q5JXX5 417 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ARHGAP36Q6ZRI8 547 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 RTN4RL1Q86UN2 441 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 FANCBQ8NB91 859 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 FBXO18Q8NFZ0 1043 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZNF384Q8TF68 577 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 SDCCAG3Q96C92 435 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 SGF29Q96ES7 293 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CYFIP2Q96F07 1278 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ARL5BQ96KC2 179 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CDK19Q9BWU1 502 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 TSPYL1Q9H0U9 437 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CYP39A1Q9NYL5 469 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 KANSL3Q9P2N6 904 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 REV1Q9UBZ9 1251 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 AURKCQ9UQB9 309 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZKSCAN5Q9Y2L8 839 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PCDHA8Q9Y5H6 950 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 FANCIQ9NVI1 1328 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 KIAA0586Q9BVV6 1533 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CTAGE15A4D2H0 777 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ISM1B1AKI9 464 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 EBAG9O00559 213 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 HNRNPDLO14979 420 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 SHOXO15266 292 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ALBP02768 609 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CTAGE8P0CG41 777 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 HOXD8P13378 290 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 CD44P16070 742 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 NFKBIAP25963 317 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 EEF1DP29692 281 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 AFMP43652 599 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CAMLGP49069 296 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 GPM6BQ13491 265 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 DOC2AQ14183 400 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 SPRED3Q2MJR0 410 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 COL13A1Q5TAT6 717 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 KANK2Q63ZY3 851 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CAPRIN2Q6IMN6 1127 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 NOTUMQ6P988 496 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 INO80CQ6PI98 192 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZNF365Q70YC5 407 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 DSG4Q86SJ6 1040 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CTAGE6Q86UF2 777 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 METTL23Q86XA0 190 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CTAGE4Q8IX94 777 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 TNPO1Q92973 898 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 RNF125Q96EQ8 232 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 MAML3Q96JK9 1138 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 THUMPD3Q9BV44 507 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 HOOK1Q9UJC3 728 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZMYND8Q9ULU4 1186 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 TBX20Q9UMR3 447 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 WDR37Q9Y2I8 494 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PPRC1Q5VV67 1664 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 KDM3AQ9Y4C1 1321 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 METTL12A8MUP2 240 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
UBR3-206ENST00000444475 ENTPD3O75355 529 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 FGF4P08620 206 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ADD1P35611 737 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 EIF2DP41214 584 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 METAP1P53582 386 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 POLGP54098 1239 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 EIF4A1P60842 406 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 ASIC1P78348 528 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CDK17Q00537 523 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PMP22Q01453 160 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 KIF23Q02241 960 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.19□□□□□ -1.74
UBR3-206ENST00000444475 MAP3K12Q12852 859 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CUL4BQ13620 913 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 RAB30Q15771 203 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ERCC6LQ2NKX8 1250 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ADCK5Q3MIX3 580 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 NRN1LQ496H8 165 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PRAMEF14Q5SWL7 426 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 LRSAM1Q6UWE0 723 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ARMC8Q8IUR7 673 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 SFRP1Q8N474 314 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 REEP2Q9BRK0 252 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 OSBPL10Q9BXB5 764 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 A1CFQ9NQ94 594 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 NECTIN3Q9NQS3 549 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PRDM8Q9NQV8 689 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 NDFIP2Q9NV92 336 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 DNAJC28Q9NX36 388 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.19□□□□□ -1.74
UBR3-206ENST00000444475 PI4KBQ9UBF8 816 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 SUFUQ9UMX1 484 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 ADAMTSL3P82987 1691 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 CLCA1A8K7I4 914 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 H0YHG0 523 aa4.18□□□□□ -1.74
UBR3-206ENST00000444475 METTL18O95568 372 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms