RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 AFMP43652 599 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 FNTBP49356 437 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 ARHGAP8P85298 464 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 CCINQ13939 588 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 SIM2Q14190 667 aaPredicted RBP12.59□□□□□ -0.39
TTC28-203ENST00000442232 PSMD6Q15008 389 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 LPAL2Q16609 132 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 RSPO4Q2I0M5 234 aaPredicted RBP12.59□□□□□ -0.39
TTC28-203ENST00000442232 EPM2AIP1Q7L775 607 aaPredicted RBP12.59□□□□□ -0.39
TTC28-203ENST00000442232 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 CCDC127Q96BQ5 260 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 CEP295NLQ96MC4 621 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
TTC28-203ENST00000442232 CCL26Q9Y258 94 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 FRYLO94915 3013 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
TTC28-203ENST00000442232 GPR179Q6PRD1 2367 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 CLIC2O15247 247 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 EXOC3O60645 756 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 RETP07949 1114 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 CYP24A1Q07973 514 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 NR1H3Q13133 447 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 GAS6Q14393 721 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 MTF1Q14872 753 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 OR6B3Q8NGW1 331 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 KBTBD7Q8WVZ9 684 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 FAM83CQ9BQN1 747 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 HPS4Q9NQG7 708 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 SLC8A2Q9UPR5 921 aa12.58□□□□□ -0.4
TTC28-203ENST00000442232 CACNA1AO00555 2505 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 TGFB1I1O43294 461 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 HCRTO43612 131 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 LRP3O75074 770 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 ATP2C2O75185 946 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 TACC1O75410 805 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 TADA3O75528 432 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 NFATC1O95644 943 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 PFKLP17858 780 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 DRD1P21728 446 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 BDNFP23560 247 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 ATICP31939 592 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 HOXD13P35453 343 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
TTC28-203ENST00000442232 USP4Q13107 963 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 BIRC3Q13489 604 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
TTC28-203ENST00000442232 WDR72Q3MJ13 1102 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 TMEM196Q5HYL7 178 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 DENND5BQ6ZUT9 1274 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 ARL14EPQ8N8R7 260 aaPredicted RBP12.57□□□□□ -0.4
TTC28-203ENST00000442232 MYCBPAPQ8TBZ2 947 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 OSCP1Q8WVF1 389 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 SCFD1Q8WVM8 642 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
TTC28-203ENST00000442232 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 ELOVL4Q9GZR5 314 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 DMXL1Q9Y485 3027 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 SPAG17Q6Q759 2223 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 ATG2BQ96BY7 2078 aa12.57□□□□□ -0.4
TTC28-203ENST00000442232 MYH10P35580 1976 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 A8MXQ7 604 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 K7ESF4 209 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 TRDMT1O14717 391 aaKnown RBP12.56□□□□□ -0.4
TTC28-203ENST00000442232 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
TTC28-203ENST00000442232 FAM163BP0C2L3 166 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 P4HA1P13674 534 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 ARSAP15289 507 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 HDCP19113 662 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 TRIM21P19474 475 aaKnown RBP12.56□□□□□ -0.4
TTC28-203ENST00000442232 LMO2P25791 158 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 HOXA6P31267 233 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 PPP3CCP48454 512 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 AP3M2P53677 418 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 ZNF77Q15935 545 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 BMT2Q1RMZ1 405 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 FBXO43Q4G163 708 aa12.56□□□□□ -0.4
TTC28-203ENST00000442232 TDRD10Q5VZ19 366 aaKnown RBP12.56□□□□□ -0.4
TTC28-203ENST00000442232 LIMS2Q7Z4I7 341 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms