RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 RPL22P35268 128 aaKnown RBP13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 PSMD6Q15008 389 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 RNF43Q68DV7 783 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 FBXO27Q8NI29 283 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 SHKBP1Q8TBC3 707 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 MAGEC3Q8TD91 643 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 MAGEB5Q9BZ81 275 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 IP6K2Q9UHH9 426 aa13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.21
SLC48A1-201ENST00000442218 MYO18AQ92614 2054 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 E5RJQ4 531 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 CDKN2BP42772 138 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 CAV1Q03135 178 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 RIPK1Q13546 671 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 ISLR2Q6UXK2 745 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 ALYREFQ86V81 257 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 COPS5Q92905 334 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 SERAC1Q96JX3 654 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 CLPTM1LQ96KA5 538 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PGLYRP2Q96PD5 576 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PPP1R12CQ9BZL4 782 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 TXLNGQ9NUQ3 528 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 AFG3L2Q9Y4W6 797 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 HEY1Q9Y5J3 304 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 EME2A4GXA9 379 aaPredicted RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 ADM5C9JUS6 153 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 KRT36O76013 467 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PYGBP11216 843 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 GARTP22102 1010 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 ELK3P41970 407 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 BPIFB4P59827 614 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PSMC1P62191 440 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 FAAP100Q0VG06 881 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 TRPC3Q13507 836 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PDK4Q16654 411 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 TFDP3Q5H9I0 405 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 RCOR2Q8IZ40 523 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 SLC25A41Q8N5S1 370 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 PSMC3IPQ9P2W1 217 aaPredicted RBP13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 RABGEF1Q9UJ41 708 aa13.76□□□□□ -0.21
SLC48A1-201ENST00000442218 STAM2O75886 525 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 CCNB1P14635 433 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ALDH3A1P30838 453 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 CCDC6Q16204 474 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 KBTBD12Q3ZCT8 623 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ZCCHC23Q6ZST2 131 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 SYDE1Q6ZW31 735 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 PPM1NQ8N819 430 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 KCTD6Q8NC69 237 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 UCMAQ8WVF2 138 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 NAF1Q96HR8 494 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ZNF302Q9NR11 478 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 SLC17A6Q9P2U8 582 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ALADP13716 330 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 PTDSS1P48651 473 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 IGBP1P78318 339 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 CAPSQ13938 189 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 OASLQ15646 514 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 CAPRIN2Q6IMN6 1127 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ABHD15Q6UXT9 468 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 CDHR3Q6ZTQ4 885 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 SCINQ9Y6U3 715 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 KIAA1217Q5T5P2 1943 aa13.75□□□□□ -0.21
SLC48A1-201ENST00000442218 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 TYROBPO43914 113 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 USP2O75604 605 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 KRT3P12035 628 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RGS7P49802 495 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 NCAPG2Q86XI2 1143 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RNF149Q8NC42 400 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RBM41Q96IZ5 413 aaKnown RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 TWNKQ96RR1 684 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 CPXM1Q96SM3 734 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms