RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 VWA3BQ502W6 1294 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 CDKAL1Q5VV42 579 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GBP6Q6ZN66 633 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 PAQR9Q6ZVX9 377 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GAREM2Q75VX8 874 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 FAM35AQ86V20 835 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 UBALD2Q8IYN6 164 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 UBR7Q8N806 425 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 SHKBP1Q8TBC3 707 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 JAKMIP2Q96AA8 810 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 CYFIP2Q96F07 1278 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 TMEM176AQ96HP8 235 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 ARID3AQ99856 593 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 MED10Q9BTT4 135 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 ZNF518BQ9C0D4 1074 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 NDST4Q9H3R1 872 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 KCNK12Q9HB15 430 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 IL21Q9HBE4 155 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GCNT4Q9P109 453 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 MUTYHQ9UIF7 546 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 BDP1A6H8Y1 2624 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 A0A1W2PRU2 124 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 F8VP50 259 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 CLDN5O00501 218 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 F11P03951 625 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 DDX6P26196 483 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 WEE1P30291 646 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 RAD23BP54727 409 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 LRMPQ12912 555 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 MTMR3Q13615 1198 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 HTR4Q13639 388 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 EXOC3L4Q17RC7 722 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 ARHGAP15Q53QZ3 475 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 MIIPQ5JXC2 388 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 DENND5BQ6ZUT9 1274 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 ENOSF1Q7L5Y1 443 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 PPM1KQ8N3J5 372 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 C12orf29Q8N999 325 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 SLC4A11Q8NBS3 891 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 SLC2A14Q8TDB8 520 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 GPR152Q8TDT2 470 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 ING5Q8WYH8 240 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 MCRS1Q96EZ8 462 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 TTLL2Q9BWV7 592 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 INTS2Q9H0H0 1204 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 ATXN3LQ9H3M9 355 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 CSNK1G1Q9HCP0 422 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 DMAP1Q9NPF5 467 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 COMMD8Q9NX08 183 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 KIAA1257Q9ULG3 409 aa15.96■□□□□ 0.15
CSNK1E-210ENST00000442216 PPP3CCP48454 512 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 ZXDAP98168 799 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 TDGQ13569 410 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 TEAD2Q15562 447 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 SDHAF4Q5VUM1 108 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 ARHGAP17Q68EM7 881 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 TRIM65Q6PJ69 517 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 EDAQ92838 391 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 E2F7Q96AV8 911 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 HEXIM2Q96MH2 286 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 ASB16Q96NS5 453 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 TASP1Q9H6P5 420 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 TRPV4Q9HBA0 871 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 PNPLA8Q9NP80 782 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 FAM49BQ9NUQ9 324 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 MAGED2Q9UNF1 606 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
CSNK1E-210ENST00000442216 HELZP42694 1942 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 CUL9Q8IWT3 2517 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ECI2O75521 394 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 AP1G2O75843 785 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 RTN3O95197 1032 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ASGR2P07307 311 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 TPM2P07951 284 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 PAEPP09466 180 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 FAM200BP0CF97 657 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 CCDC130P13994 396 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 CACNA2D1P54289 1103 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ORC1Q13415 861 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 PHLDB3Q6NSJ2 640 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 TMEM150AQ86TG1 271 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 NUP93Q8N1F7 819 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 SLC44A3Q8N4M1 653 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ANKRD20A12PQ8NF67 263 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 FGF14Q92915 247 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 SMARCD2Q92925 531 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 ELSPBP1Q96BH3 223 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 KRT82Q9NSB4 513 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 TMEM30AQ9NV96 361 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 FANCLQ9NW38 375 aa15.94■□□□□ 0.14
CSNK1E-210ENST00000442216 IL37Q9NZH6 218 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms