RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CSRNP2Q9H175 543 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 NXF3Q9H4D5 531 aaKnown RBP6.94□□□□□ -1.3
HDAC6-210ENST00000441703 FSCN3Q9NQT6 498 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 HPCAL4Q9UM19 191 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 INSL5Q9Y5Q6 135 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 BACE2Q9Y5Z0 518 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
HDAC6-210ENST00000441703 TEP1Q99973 2627 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 TMEM150BA6NC51 233 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 FAM205CA6NFA0 338 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 B8ZZF3 427 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ERVH48-1M5A8F1 160 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 MSH4O15457 936 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 RTN2O75298 545 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 MOSPD3O75425 235 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ALDH1A2O94788 518 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 PRKCBP05771 671 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 EPB41P11171 864 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 CD59P13987 128 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 HOXD12P35452 270 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 PI4KAP42356 2102 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 CCT5P48643 541 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ROR1Q01973 937 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 TWF1Q12792 350 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 FBXW10Q5XX13 1052 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ISM2Q6H9L7 571 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ANO7Q6IWH7 933 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 RAB11FIP4Q86YS3 637 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ARID3BQ8IVW6 561 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 FAM177A1Q8N128 213 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 REXO1Q8N1G1 1221 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 FBXL16Q8N461 479 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 OTUD6BQ8N6M0 293 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 PDCD7Q8N8D1 485 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 GSTCDQ8NEC7 633 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ENOX1Q8TC92 643 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 BPIFB1Q8TDL5 484 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 COG1Q8WTW3 980 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 PSPC1Q8WXF1 523 aaKnown RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 SLC7A3Q8WY07 619 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 SLC5A5Q92911 643 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 RSPRY1Q96DX4 576 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF274Q96GC6 653 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 SGSM3Q96HU1 749 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 CLIC6Q96NY7 704 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 NAPGQ99747 312 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 SH2D3AQ9BRG2 576 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 TEKT3Q9BXF9 490 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 CAPS2Q9BXY5 557 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 UNC45AQ9H3U1 944 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 MINDY3Q9H8M7 445 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 OBP2AQ9NY56 170 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 NUP210Q8TEM1 1887 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 KIF26AQ9ULI4 1882 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-210ENST00000441703 TRIP11Q15643 1979 aa6.93□□□□□ -1.3
HDAC6-210ENST00000441703 CELSR3Q9NYQ7 3312 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ADAMTS9Q9P2N4 1935 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 A0A087WWV3 80 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 A0A1B0GVL5 298 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 A0A1W2PRU2 124 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 AKR1B15C9JRZ8 316 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ANKRD65E5RJM6 399 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 H0YHG0 523 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SPTLC2O15270 562 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 TRAPPC3O43617 180 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 OPA1O60313 960 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 TSPAN1O60635 241 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 RASSF9O75901 435 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 KRT38O76015 456 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 KIAA0754O94854 1291 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 NPTXRO95502 500 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 THP07101 528 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SERPINF2P08697 491 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ATP1A3P13637 1013 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ATF2P15336 505 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF18P17022 549 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 FGFR3P22607 806 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 CSRP3P50461 194 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SLC8A3P57103 927 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SARNPP82979 210 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 STK3Q13188 491 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 BYSLQ13895 437 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 NR1I3Q14994 352 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 STK38Q15208 465 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ARHGAP15Q53QZ3 475 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 COLEC12Q5KU26 742 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 B3GNT9Q6UX72 402 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 Q6ZUG5 572 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ANO5Q75V66 913 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 MIER3Q7Z3K6 550 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 EXOC8Q8IYI6 725 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms