RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 KCNG1Q9UIX4 513 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 CPSF3Q9UKF6 684 aaKnown RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 DNAH12Q6ZR08 3092 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 LSM8O95777 96 aaKnown RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 EIF4BP23588 611 aaKnown RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 MOGSQ13724 837 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 FAXCQ5TGI0 409 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 LRRC38Q5VT99 294 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 RIBC1Q8N443 379 aaPredicted RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 PTPRN2Q92932 1015 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 GGA3Q9NZ52 723 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 SHOC2Q9UQ13 582 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 STARD13Q9Y3M8 1113 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 A0A0G2JND7 137 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 H0Y3Z8 333 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 NFICP08651 508 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 RBP3P10745 1247 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 MIPP30301 263 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 TAF1BQ53T94 588 aaPredicted RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 WDR78Q5VTH9 848 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 C1orf228Q6PIY5 440 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 ZPBP2Q6X784 338 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 MTDHQ86UE4 582 aaKnown RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 PPIL6Q8IXY8 311 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 SPATA18Q8TC71 538 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 SEPT1Q8WYJ6 367 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 PIWIL1Q96J94 861 aaKnown RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 DDX56Q9NY93 547 aaKnown RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 NKX1-2Q9UD57 310 aaPredicted RBP14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.14
HERPUD1-204ENST00000439977 IGKV6D-21A0A0A0MT36 114 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 C19orf81C9J6K1 198 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 NOP56O00567 594 aaKnown RBP14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 IQCF3P0C7M6 154 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 NEFHP12036 1026 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 EPHB2P29323 1055 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ABCD1P33897 745 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 RFC5P40937 340 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ARL4CP56559 192 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 C15orf59Q2T9L4 293 aaPredicted RBP14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 LRRC6Q86X45 466 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 NAT8LQ8N9F0 302 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 RFWD2Q8NHY2 731 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 GRAMD1AQ96CP6 724 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 PLCD4Q9BRC7 762 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 FOXP3Q9BZS1 431 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 C15orf41Q9Y2V0 281 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM155BO75949 473 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 TNNC2P02585 160 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ITGB3P05106 788 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 T-ENOLP0DO92 83 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ATP11AP98196 1134 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 NR1H3Q13133 447 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ATF7IP2Q5U623 682 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 EBF2Q9HAK2 575 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 SMG5Q9UPR3 1016 aaKnown RBP14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
HERPUD1-204ENST00000439977 SIGLEC16A6NMB1 481 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ABLIM1O14639 778 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 SKAP2O75563 359 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 CCNB1P14635 433 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ICAM3P32942 547 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ELK3P41970 407 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 RAD23BP54727 409 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 HADHQ16836 314 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM102AQ5T9C2 384 aaPredicted RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 TLDC1Q6P9B6 456 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 TDRPQ86YL5 185 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ZBTB8OSQ8IWT0 167 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ATP11CQ8NB49 1132 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 GPATCH2LQ9NWQ4 482 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 SIX4Q9UIU6 781 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 M0QYV0 167 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 EFNA5P52803 228 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 YARSP54577 528 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 YWHAGP61981 247 aaKnown RBP eCLIP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 YWHAEP62258 255 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 CCDC142Q17RM4 750 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF667Q5HYK9 610 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 EFHC2Q5JST6 749 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 SCYL2Q6P3W7 929 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 DARS2Q6PI48 645 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 XYLT1Q86Y38 959 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 C10orf82Q8WW14 230 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 ANKRD36BP1Q96IX9 119 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 PEBP4Q96S96 227 aa14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 TRIM56Q9BRZ2 755 aaKnown RBP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.19□□□□□ -0.14
HERPUD1-204ENST00000439977 RNF19AQ9NV58 838 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms