RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MGAT3Q09327 533 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 TRIM32Q13049 653 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 TAZQ16635 292 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 FAM102AQ5T9C2 384 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-202ENST00000439724 CYP4F22Q6NT55 531 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 FAM183BPQ6ZVS7 135 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 DPH6Q7L8W6 267 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 EMC1Q8N766 993 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 C12orf29Q8N999 325 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 KLHDC9Q8NEP7 349 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 SLC35F5Q8WV83 523 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 WNT8BQ93098 351 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 SNF8Q96H20 258 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 PPP1R10Q96QC0 940 aaKnown RBP12.39□□□□□ -0.43
SMAD3-202ENST00000439724 CNPY3Q9BT09 278 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 XPNPEP3Q9NQH7 507 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 ASNSD1Q9NWL6 643 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 HESX1Q9UBX0 185 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 ST3GAL5Q9UNP4 418 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-202ENST00000439724 C3orf70A6NLC5 250 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-202ENST00000439724 C2CD4BA6NLJ0 364 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 A8MXQ7 604 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 KIF3CO14782 793 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 LIASO43766 372 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 RNF8O76064 485 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CHRNA1P02708 482 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 KRT10P13645 584 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 ITIH2P19823 946 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 GPD1P21695 349 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 IVDP26440 423 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 IL1R2P27930 398 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CAV1Q03135 178 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 ZNF844Q08AG5 666 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CEP85LQ5SZL2 805 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 OR6B2Q6IFH4 312 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-202ENST00000439724 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 OLFML1Q6UWY5 402 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-202ENST00000439724 TMEM110Q86TL2 294 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 ZDHHC17Q8IUH5 632 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-202ENST00000439724 HACE1Q8IYU2 909 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 APPL2Q8NEU8 664 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 TMBIM4Q9HC24 238 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 FAM49BQ9NUQ9 324 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 FAM105AQ9NUU6 356 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 ASIC3Q9UHC3 531 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 ATP8A1Q9Y2Q0 1164 aa12.38□□□□□ -0.43
SMAD3-202ENST00000439724 GOLGA6L10A6NI86 522 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 HMGB1P1B2RPK0 211 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 TP73O15350 636 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 NUDT17P0C025 328 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 FGFR1P11362 822 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ATF2P15336 505 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 CCND3P30281 292 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 GNL1P36915 607 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 SCNN1AP37088 669 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 RPL34P49207 117 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 PMS2P54278 862 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 BCAT1P54687 386 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 EIF3BP55884 814 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ADCY2Q08462 1091 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 BST2Q10589 180 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 CCDC89Q8N998 374 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 NKD2Q969F2 451 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ATP6V1G3Q96LB4 118 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 EPB41L4BQ9H329 900 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 SNX25Q9H3E2 840 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 GOLGA2P5Q9HBQ8 144 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 DRG1Q9Y295 367 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 GPR182O15218 404 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 HUS1O60921 280 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
SMAD3-202ENST00000439724 ASGR1P07306 291 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 CTSHP09668 335 aa12.37□□□□□ -0.43
SMAD3-202ENST00000439724 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms