RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LILRB5O75023 590 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 BDNFP23560 247 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 BIRC3Q13489 604 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 ZNF268Q14587 947 aaPredicted RBP19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 MDH1BQ5I0G3 518 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 SPATA32Q96LK8 384 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 EBF3Q9H4W6 596 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 CRTAC1Q9NQ79 661 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 EHD2Q9NZN4 543 aa19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 NXF1Q9UBU9 619 aaKnown RBP19.71■□□□□ 0.75
AC004540.1-201ENST00000439120 TRIM66O15016 1216 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 TACC1O75410 805 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 TADA3O75528 432 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 PDE6CP51160 858 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 KRT85P78386 507 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 FOXK2Q01167 660 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 FAM160A1Q05DH4 1040 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 PSMD2Q13200 908 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 KCNB1Q14721 858 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 PDGFRLQ15198 375 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 TRIM68Q6AZZ1 485 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 Q6ZS52 159 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 SYNPOQ8N3V7 929 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 MYCBPAPQ8TBZ2 947 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 PAGE5Q96GU1 130 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 PCED1BQ96HM7 432 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 SPATA17Q96L03 361 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 CEP295NLQ96MC4 621 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 FAM83CQ9BQN1 747 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 MRPL45Q9BRJ2 306 aaKnown RBP19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 USP25Q9UHP3 1055 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 GMEB2Q9UKD1 530 aa19.7■□□□□ 0.74
AC004540.1-201ENST00000439120 A0A1B0GVL5 298 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 ACTN4O43707 911 aaKnown RBP19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 TDGF1P13385 188 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 PFKFB1P16118 471 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 ATICP31939 592 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 IFNAR2P48551 515 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 MYL6P60660 151 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 GRSF1Q12849 480 aaKnown RBP eCLIP19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 GAS6Q14393 721 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 MTF1Q14872 753 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 DENND5BQ6ZUT9 1274 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 CPA6Q8N4T0 437 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 HPS4Q9NQG7 708 aa19.69■□□□□ 0.74
AC004540.1-201ENST00000439120 GVINP1Q7Z2Y8 2422 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 A8MXQ7 604 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 FAM163BP0C2L3 166 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 ARSAP15289 507 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 CMA1P23946 247 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 CASP4P49662 377 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 AP3M2P53677 418 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 CCINQ13939 588 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 ZNF699Q32M78 642 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 KMT5BQ4FZB7 885 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 PRR23BQ6ZRT6 265 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 GPR161Q8N6U8 529 aaKnown RBP19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 ARL14EPQ8N8R7 260 aaPredicted RBP19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 ZNF516Q92618 1163 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 CCDC47Q96A33 483 aaKnown RBP19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 CYP2S1Q96SQ9 504 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 DUS2Q9NX74 493 aaKnown RBP19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 TRPM5Q9NZQ8 1165 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 FRYLO94915 3013 aa19.68■□□□□ 0.74
AC004540.1-201ENST00000439120 C2orf78A6NCI8 922 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 CHURC1-FNTBB4DL54 471 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 KLRC4O43908 158 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 STAU1O95793 577 aaKnown RBP19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 MYL1P05976 194 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 PTPN1P18031 435 aaKnown RBP19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 HDCP19113 662 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 FNTBP49356 437 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 STK4Q13043 487 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 WDR44Q5JSH3 913 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 HEATR6Q6AI08 1181 aaKnown RBP19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 ERMP1Q7Z2K6 904 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 KIAA0895Q8NCT3 520 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 OSCP1Q8WVF1 389 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 ATP2A3Q93084 1043 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 SLC22A12Q96S37 553 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 ELOVL4Q9GZR5 314 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 ATP8B3O60423 1300 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 WDR87Q6ZQQ6 2873 aa19.67■□□□□ 0.74
AC004540.1-201ENST00000439120 PTPRDP23468 1912 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 GREB1Q4ZG55 1949 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 EP300Q09472 2414 aaPredicted RBP19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 ZNF292O60281 2723 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 F8VP50 259 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 KIF20AO95235 890 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 PAPSS2O95340 614 aaPredicted RBP19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 ABL1P00519 1130 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 SYKP43405 635 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 USP4Q13107 963 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 ZNF77Q15935 545 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 LPAL2Q16609 132 aa19.66■□□□□ 0.74
AC004540.1-201ENST00000439120 ZNF667Q5HYK9 610 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms