RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 CHFRQ96EP1 664 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 TRMT2BQ96GJ1 504 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 FUBP3Q96I24 572 aaKnown RBP eCLIP9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 MYRFLQ96LU7 910 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 FNBP1Q96RU3 617 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 CGRRF1Q99675 332 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 SNX25Q9H3E2 840 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 KIF9Q9HAQ2 790 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 SLC39A2Q9NP94 309 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 POLR3BQ9NW08 1133 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 DLL3Q9NYJ7 618 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 MAGEC2Q9UBF1 373 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 CDH9Q9ULB4 789 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 PCDHA7Q9UN72 937 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 WNT6Q9Y6F9 365 aa9.52□□□□□ -0.89
CTDSPL-205ENST00000436654 DMXL1Q9Y485 3027 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 CLSTN1O94985 981 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 PAPSS2O95340 614 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 EGFP01133 1207 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 USP17L7P0C7H9 530 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 TGM1P22735 817 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 IFNAR2P48551 515 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 CASP4P49662 377 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 USP46P62068 366 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 TNNC1P63316 161 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 EHHADHQ08426 723 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 GRSF1Q12849 480 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 CUL4BQ13620 913 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 PKP1Q13835 747 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF268Q14587 947 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 MTF1Q14872 753 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 PDGFRLQ15198 375 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF77Q15935 545 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 CEP68Q76N32 757 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 HS2ST1Q7LGA3 356 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 SYNPOQ8N3V7 929 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 CPA6Q8N4T0 437 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 GPR161Q8N6U8 529 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 FSIP1Q8NA03 581 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 XXYLT1Q8NBI6 393 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 SH3RF2Q8TEC5 729 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ELMO3Q96BJ8 720 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 FBRSL1Q9HCM7 1045 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 DUS2Q9NX74 493 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 NME7Q9Y5B8 376 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF292O60281 2723 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 UBE4BO95155 1302 aa9.51□□□□□ -0.89
CTDSPL-205ENST00000436654 MYH11P35749 1972 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 TPRP12270 2363 aaKnown RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 PATJQ8NI35 1801 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 F8VP50 259 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 TRDMT1O14717 391 aaKnown RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 EXOC3O60645 756 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 RNF40O75150 1001 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 RETP07949 1114 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 HDCP19113 662 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 ANXA13P27216 316 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 GJA4P35212 333 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 GNL1P36915 607 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 GALK1P51570 392 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 CACNA2D1P54289 1103 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 MYL6P60660 151 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 LMNB2Q03252 620 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 IFRD2Q12894 506 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 USP4Q13107 963 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 TRPC3Q13507 836 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 KCNB1Q14721 858 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 MAPRE1Q15691 268 aaKnown RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 WDR72Q3MJ13 1102 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 VSTM1Q6UX27 236 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 MYCBPAPQ8TBZ2 947 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 OSCP1Q8WVF1 389 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 PCED1BQ96HM7 432 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 SPATA17Q96L03 361 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 P2RY13Q9BPV8 354 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 LINC00597Q9H2U6 94 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 DPEP3Q9H4B8 488 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 ECT2Q9H8V3 914 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 MAGEF1Q9HAY2 307 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 GCNT4Q9P109 453 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 SLC8A2Q9UPR5 921 aa9.5□□□□□ -0.89
CTDSPL-205ENST00000436654 GPR179Q6PRD1 2367 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 MIA3Q5JRA6 1907 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms