RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 VN1R2Q8NFZ6 395 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 OLIG1Q8TAK6 271 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 FEZF2Q8TBJ5 459 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 GPR152Q8TDT2 470 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 DNAI2Q9GZS0 605 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
CALD1-209ENST00000436461 SEPT11Q9NVA2 429 aaKnown RBP17.79■□□□□ 0.44
CALD1-209ENST00000436461 ARHGAP20Q9P2F6 1191 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 FBXW11Q9UKB1 542 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 KIAA1257Q9ULG3 409 aa17.79■□□□□ 0.44
CALD1-209ENST00000436461 LINC01565O15544 149 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 GRIK1P39086 918 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 PRKCIP41743 596 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 HYAL1Q12794 435 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 DDR2Q16832 855 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 CFAP221Q4G0U5 840 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 TPGS2Q68CL5 300 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 LCLAT1Q6UWP7 414 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 CLEC20AQ6ZU45 233 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 KREMEN2Q8NCW0 462 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 ZMIZ2Q8NF64 920 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 SPPL2BQ8TCT7 592 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 SLC22A17Q8WUG5 538 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 SYN2Q92777 582 aaPredicted RBP17.78■□□□□ 0.44
CALD1-209ENST00000436461 SMARCD1Q96GM5 515 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 GUCD1Q96NT3 240 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 PCDHB18PQ96TA0 734 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 GAS2L1Q99501 681 aaPredicted RBP17.78■□□□□ 0.44
CALD1-209ENST00000436461 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
CALD1-209ENST00000436461 SMOQ99835 787 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 AGPAT1Q99943 283 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 PDCL3Q9H2J4 239 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
CALD1-209ENST00000436461 F8VP50 259 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 PRRG1O14668 218 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 MED7O43513 233 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 SERPING1P05155 500 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 CCDC172P0C7W6 258 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 FAM200BP0CF97 657 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 HNRNPH3P31942 346 aaKnown RBP17.77■□□□□ 0.44
CALD1-209ENST00000436461 ELF1P32519 619 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 CDR2Q01850 454 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 PDE4CQ08493 712 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 DNAAF5Q86Y56 855 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 SLC7A14Q8TBB6 771 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 SECISBP2LQ93073 1101 aaKnown RBP17.77■□□□□ 0.44
CALD1-209ENST00000436461 FUBP3Q96I24 572 aaKnown RBP eCLIP17.77■□□□□ 0.44
CALD1-209ENST00000436461 PDLIM2Q96JY6 352 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 SYT11Q9BT88 431 aa17.77■□□□□ 0.44
CALD1-209ENST00000436461 PATJQ8NI35 1801 aa17.77■□□□□ 0.43
CALD1-209ENST00000436461 C5orf42Q9H799 3197 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 PIK3R2O00459 728 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 RFPL2O75678 378 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 C8AP07357 584 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 HAPLN1P10915 354 aaPredicted RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 NPR3P17342 541 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 ATF6P18850 670 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 MEA1Q16626 185 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 TSR1Q2NL82 804 aaKnown RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 PKDCCQ504Y2 493 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 WDTC1Q8N5D0 677 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 ANKRD52Q8NB46 1076 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 C1orf131Q8NDD1 294 aaKnown RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 C2orf15Q8WU43 125 aaKnown RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 DUSP16Q9BY84 665 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 ZNHIT6Q9NWK9 470 aaKnown RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 HESX1Q9UBX0 185 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 CYTH4Q9UIA0 394 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 YIPF1Q9Y548 306 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 GLP2RO95838 553 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 EIF4A3P38919 411 aaKnown RBP17.76■□□□□ 0.43
CALD1-209ENST00000436461 RGS7P49802 495 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 BCAT1P54687 386 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 TWF1Q12792 350 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 SMARCB1Q12824 385 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 GPRIN1Q7Z2K8 1008 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 FMNL3Q8IVF7 1028 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 PCDHGC3Q9UN70 934 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 INSL5Q9Y5Q6 135 aa17.76■□□□□ 0.43
CALD1-209ENST00000436461 ATP8B3O60423 1300 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 TMCO5BA8MYB1 307 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 DDX3XO00571 662 aaKnown RBP eCLIP17.75■□□□□ 0.43
CALD1-209ENST00000436461 TNFAIP3P21580 790 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 GPD2P43304 727 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 BST2Q10589 180 aaKnown RBP17.75■□□□□ 0.43
CALD1-209ENST00000436461 IFRD2Q12894 506 aaPredicted RBP17.75■□□□□ 0.43
CALD1-209ENST00000436461 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 KCNC3Q14003 757 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 STILQ15468 1287 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 GPR153Q6NV75 609 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 ZNF677Q86XU0 584 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 TCEAL8Q8IYN2 117 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 C12orf76Q8N812 135 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms