RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 EBF1Q9UH73 591 aa11.74□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SLC8A2Q9UPR5 921 aa11.74□□□□□ -0.53
SPTLC1P4-201ENST00000435997 OBSL1O75147 1896 aa11.74□□□□□ -0.53
SPTLC1P4-201ENST00000435997 C2orf78A6NCI8 922 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PRPF6O94906 941 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 OLFM2O95897 454 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 USP17L7P0C7H9 530 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PFKLP17858 780 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SYT1P21579 422 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PMLP29590 882 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 HOXD13P35453 343 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MPLP40238 635 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 STAT6P42226 847 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ZXDBP98169 803 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 E2F4Q16254 413 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PLK5Q496M5 336 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 VSTM1Q6UX27 236 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 RPLP0P6Q8NHW5 317 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CD101Q93033 1021 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ATP2A3Q93084 1043 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 USP28Q96RU2 1077 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SYT15Q9BQS2 421 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TTLL2Q9BWV7 592 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TRPC7Q9HCX4 862 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PANK4Q9NVE7 773 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CDH9Q9ULB4 789 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 NME7Q9Y5B8 376 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 WNT6Q9Y6F9 365 aa11.73□□□□□ -0.53
SPTLC1P4-201ENST00000435997 AXIN1O15169 862 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ATP2C2O75185 946 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 KRT37O76014 449 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 APBB3O95704 486 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CKMP06732 381 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 KRT19P08727 400 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TMEM191BP0C7N4 346 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CCDC192P0DO97 292 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 IDEP14735 1019 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 WARSP23381 471 aaKnown RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 LMO2P25791 158 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 USP46P62068 366 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PSMC1P62191 440 aaKnown RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SHC2P98077 582 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CCDC6Q16204 474 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 AASDHQ4L235 1098 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 LMBRD2Q68DH5 695 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CNNM4Q6P4Q7 775 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 C4orf50Q6ZRC1 276 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EPM2AIP1Q7L775 607 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CBWD2Q8IUF1 395 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ARL14EPQ8N8R7 260 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ACDQ96AP0 544 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 ANKRD36BP1Q96IX9 119 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CYP2S1Q96SQ9 504 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PCIF1Q9H4Z3 704 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 DENND4CQ5VZ89 1909 aa11.72□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EIF3DO15371 548 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TACC1O75410 805 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 OPRD1P41143 372 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 IFNAR2P48551 515 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PDE6CP51160 858 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 NOP14P78316 857 aaKnown RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SLC7A9P82251 487 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EHHADHQ08426 723 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 DMC1Q14565 340 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 KCNB1Q14721 858 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 RASSF3Q86WH2 238 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 C12orf50Q8NA57 414 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MYCBPAPQ8TBZ2 947 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 USP33Q8TEY7 942 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TRIM9Q9C026 710 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 DUSP15Q9H1R2 295 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SMOC1Q9H4F8 434 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TMEM30AQ9NV96 361 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 HSPBP1Q9NZL4 362 aa11.71□□□□□ -0.53
SPTLC1P4-201ENST00000435997 CHD8Q9HCK8 2581 aa11.71□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MAP1BP46821 2468 aaKnown RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms