RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SV2CQ496J9 727 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 PKDCCQ504Y2 493 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 RAB6CQ53S08 254 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 SH3PXD2AQ5TCZ1 1133 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 TRNP1Q6NT89 227 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 ADGRF2Q8IZF7 708 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 ZIM3Q96PE6 472 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 RAB6CQ9H0N0 254 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 PCSK1NQ9UHG2 260 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 GPR182O15218 404 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 HUS1O60921 280 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 GABBR2O75899 941 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 PNPLA4P41247 253 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 FNTAP49354 379 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 SCNN1GP51170 649 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 PLTPP55058 493 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 RNF180Q86T96 592 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 UNC93AQ86WB7 457 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 OSTM1Q86WC4 334 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 SCUBE3Q8IX30 993 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 B3GNT5Q9BYG0 378 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 HESX1Q9UBX0 185 aa17.55■□□□□ 0.4
USHBP1-203ENST00000431146 ARL5CA6NH57 179 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 HSF2BPO75031 334 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 ATP2C2O75185 946 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 ECEL1O95672 775 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 HOXD10P28358 340 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 SLC25A11Q02978 314 aaKnown RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 LPIN1Q14693 890 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 STILQ15468 1287 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 TRIP13Q15645 432 aaPredicted RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 ODF2Q5BJF6 829 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 RPAINQ86UA6 219 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 RCOR2Q8IZ40 523 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 EIF1ADQ8N9N8 165 aaKnown RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 PIK3R5Q8WYR1 880 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 TSPYL2Q9H2G4 693 aaPredicted RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CYB561D2O14569 222 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 RNF40O75150 1001 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 LRPAP1P30533 357 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CLCNKBP51801 687 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 KRT17Q04695 432 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 PPP1R7Q15435 360 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CDO1Q16878 200 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 C15orf59Q2T9L4 293 aaPredicted RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 LRRC38Q5VT99 294 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 FAM71BQ8TC56 605 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 FBXO25Q8TCJ0 367 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 SLC35F5Q8WV83 523 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 RBM41Q96IZ5 413 aaKnown RBP17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 PAAF1Q9BRP4 392 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 MIS12Q9H081 205 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 MED4Q9NPJ6 270 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CHST12Q9NRB3 414 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 ZDHHC18Q9NUE0 388 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 GRHL1Q9NZI5 618 aa17.54■□□□□ 0.4
USHBP1-203ENST00000431146 CASTOR2A6NHX0 329 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 THP07101 528 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
USHBP1-203ENST00000431146 CFAP58Q5T655 872 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 WSCD1Q658N2 575 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 ZDHHC24Q6UX98 284 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 MREGQ8N565 214 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 C3orf58Q8NDZ4 430 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 SLC2A14Q8TDB8 520 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 FNIP1Q8TF40 1166 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 CLEC4CQ8WTT0 213 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 MAIP1Q8WWC4 291 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 RXFP2Q8WXD0 754 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 FMO2Q99518 471 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 LCMT1Q9UIC8 334 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 TIMM13Q9Y5L4 95 aaPredicted RBP17.53■□□□□ 0.4
USHBP1-203ENST00000431146 PODXLO00592 558 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 KRT14P02533 472 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 INHAP05111 366 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 TKTP29401 623 aaKnown RBP17.53■□□□□ 0.4
USHBP1-203ENST00000431146 MIPP30301 263 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 UAP1Q16222 522 aaPredicted RBP17.53■□□□□ 0.4
USHBP1-203ENST00000431146 PRUNE1Q86TP1 453 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.53■□□□□ 0.4
USHBP1-203ENST00000431146 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 TRPV6Q9H1D0 765 aa17.53■□□□□ 0.4
USHBP1-203ENST00000431146 CLGNO14967 610 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 PAPSS1O43252 624 aaPredicted RBP17.52■□□□□ 0.4
USHBP1-203ENST00000431146 POMCP01189 267 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 CD48P09326 243 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 PDGFRAP16234 1089 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 HSD17B3P37058 310 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 VEGFBP49765 207 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 DHX9Q08211 1270 aaKnown RBP17.52■□□□□ 0.4
USHBP1-203ENST00000431146 PTK7Q13308 1070 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms