RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 FSIP1Q8NA03 581 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 ATAD1Q8NBU5 361 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 SPPL2BQ8TCT7 592 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 C2orf15Q8WU43 125 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 ZMAT2Q96NC0 199 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 TIPINQ9BVW5 301 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 GTPBP2Q9BX10 602 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 TPSD1Q9BZJ3 242 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 TM6SF1Q9BZW5 370 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 SMG9Q9H0W8 520 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 RPF1Q9H9Y2 349 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 C17orf75Q9HAS0 396 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 PLEKHA5Q9HAU0 1116 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 DDX19AQ9NUU7 478 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 TDP1Q9NUW8 608 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 DUS2Q9NX74 493 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 HSFX1Q9UBD0 423 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 INVSQ9Y283 1065 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 R3HCC1Q9Y3T6 440 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
ECHDC1-207ENST00000430841 DSPP15924 2871 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 TRAV19A0A0A6YYK7 116 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 M0QZQ0 153 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 HNRNPDLO14979 420 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 DCLK1O15075 740 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 PFKFB2O60825 505 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 NFATC1O95644 943 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ADH1CP00326 375 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 EDN1P05305 212 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 CYP3A5P20815 502 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 IGFBP6P24592 240 aaPredicted RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 WEE1P30291 646 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 PDE6CP51160 858 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 SEC13P55735 322 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 MTF1Q14872 753 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 NR6A1Q15406 480 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 XKR4Q5GH76 650 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 EARS2Q5JPH6 523 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 PMS2CLQ68D20 193 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 TRIM68Q6AZZ1 485 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 PKN3Q6P5Z2 889 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 CD300LGQ6UXG3 332 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ALKAL1Q6UXT8 129 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ARMCX6Q7L4S7 300 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 MTMR9Q96QG7 549 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 POLD4Q9HCU8 107 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 POLMQ9NP87 494 aaPredicted RBP8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 EBF1Q9UH73 591 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 NUP205Q92621 2012 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ATG2BQ96BY7 2078 aa8.47□□□□□ -1.05
ECHDC1-207ENST00000430841 ZZEF1O43149 2961 aa8.46□□□□□ -1.05
ECHDC1-207ENST00000430841 THADAQ6YHU6 1953 aa8.46□□□□□ -1.05
ECHDC1-207ENST00000430841 GCN1Q92616 2671 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 OPHN1O60890 802 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 CSH1P0DML2 217 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 CSH2P0DML3 217 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ARSAP15289 507 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.068e-7■■■■□ 25.7
ECHDC1-207ENST00000430841 LRPAP1P30533 357 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 RPL10AP62906 217 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 GFPT1Q06210 699 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 SPAG1Q07617 926 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 HNRNPDQ14103 355 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 TMEM132DQ14C87 1099 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ZNF174Q15697 407 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ZNF423Q2M1K9 1284 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 C2orf27AQ580R0 203 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 TTC38Q5R3I4 469 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 LYSMD4Q5XG99 296 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ZPBP2Q6X784 338 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 GATA6Q92908 595 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 SENP8Q96LD8 212 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ZNF560Q96MR9 790 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 EVA1BQ9NVM1 165 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 ARHGAP28Q9P2N2 729 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 DNMT3AQ9Y6K1 912 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 MYH11P35749 1972 aa8.46□□□□□ -1.06
ECHDC1-207ENST00000430841 TCHHQ07283 1943 aa8.45□□□□□ -1.06
ECHDC1-207ENST00000430841 EML5Q05BV3 1969 aa8.45□□□□□ -1.06
ECHDC1-207ENST00000430841 MYMKA6NI61 221 aa8.45□□□□□ -1.06
ECHDC1-207ENST00000430841 AP5Z1O43299 807 aa8.45□□□□□ -1.06
ECHDC1-207ENST00000430841 MAN1A2O60476 641 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms