RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 C2orf78A6NCI8 922 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 CASP4P49662 377 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 CACNA2D1P54289 1103 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 FSTL4Q6MZW2 842 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 SCN4BQ8IWT1 228 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 XXYLT1Q8NBI6 393 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 MRPS31Q92665 395 aaKnown RBP17.41■□□□□ 0.38
PTPRA-206ENST00000430705 CCDC127Q96BQ5 260 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 CYP2S1Q96SQ9 504 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 DPEP3Q9H4B8 488 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 KIF9Q9HAQ2 790 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 PARD6AQ9NPB6 346 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 GCNT4Q9P109 453 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 CDH9Q9ULB4 789 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
PTPRA-206ENST00000430705 PVALEFA0A1B0GWK0 134 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 SOBPA7XYQ1 873 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 CHURC1-FNTBB4DL54 471 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 PDGFRBP09619 1106 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 BDNFP23560 247 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 CXCL12P48061 93 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 FNTBP49356 437 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 ZXDBP98169 803 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 STK4Q13043 487 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 SRSF5Q13243 272 aaKnown RBP17.4■□□□□ 0.38
PTPRA-206ENST00000430705 RUNX3Q13761 415 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 TMEM196Q5HYL7 178 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 ELMO3Q96BJ8 720 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 PCED1BQ96HM7 432 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 FBRSL1Q9HCM7 1045 aaKnown RBP17.4■□□□□ 0.38
PTPRA-206ENST00000430705 TRPC7Q9HCX4 862 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 NCDNQ9UBB6 729 aa17.4■□□□□ 0.38
PTPRA-206ENST00000430705 UXTQ9UBK9 157 aaPredicted RBP17.4■□□□□ 0.38
PTPRA-206ENST00000430705 TACC1O75410 805 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 TNNI1P19237 187 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MYL6P60660 151 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MTF1Q14872 753 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 LPAL2Q16609 132 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MDH1BQ5I0G3 518 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 TDRD10Q5VZ19 366 aaKnown RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 C4orf50Q6ZRC1 276 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MYCBPAPQ8TBZ2 947 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 EZH1Q92800 747 aaPredicted RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 SPATA17Q96L03 361 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MMS19Q96T76 1030 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 THG1LQ9NWX6 298 aaKnown RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 FAM13BQ9NYF5 915 aa17.39■□□□□ 0.37
PTPRA-206ENST00000430705 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
PTPRA-206ENST00000430705 LRRIQ3A6PVS8 624 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-206ENST00000430705 HRO43593 1189 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 STAU1O95793 577 aaKnown RBP17.38■□□□□ 0.37
PTPRA-206ENST00000430705 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 PFKFB1P16118 471 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 CYP27A1Q02318 531 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 VSTM1Q6UX27 236 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 ERMP1Q7Z2K6 904 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 ARL14EPQ8N8R7 260 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-206ENST00000430705 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 FNBP1Q96RU3 617 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 TTLL2Q9BWV7 592 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 KCTD10Q9H3F6 313 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 SMYD3Q9H7B4 428 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-206ENST00000430705 DMAC2Q9NW81 257 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 DLL3Q9NYJ7 618 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 HPSEQ9Y251 543 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 WNT6Q9Y6F9 365 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 EML5Q05BV3 1969 aa17.38■□□□□ 0.37
PTPRA-206ENST00000430705 TRAV19A0A0A6YYK7 116 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 F8VP50 259 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 TRDMT1O14717 391 aaKnown RBP17.37■□□□□ 0.37
PTPRA-206ENST00000430705 VNN1O95497 513 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 EGFP01133 1207 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 CKMP06732 381 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
PTPRA-206ENST00000430705 NRLP54845 237 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 CLDN10P78369 228 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 EML3Q32P44 896 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 WDR72Q3MJ13 1102 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 KMT5BQ4FZB7 885 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 ZNF518BQ9C0D4 1074 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 SDCBP2Q9H190 292 aa17.37■□□□□ 0.37
PTPRA-206ENST00000430705 CLDN5O00501 218 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 EXOC3O60645 756 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 USP17L7P0C7H9 530 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
PTPRA-206ENST00000430705 TCF3P15923 654 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 GJA4P35212 333 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
PTPRA-206ENST00000430705 GRIK1P39086 918 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 RAP1GAPP47736 663 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms