RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 EEF2KMTQ96G04 330 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 TRMT2BQ96GJ1 504 aaKnown RBP13.37□□□□□ -0.27
SMPD4-204ENST00000430682 FUBP3Q96I24 572 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMPD4-204ENST00000430682 CYP2S1Q96SQ9 504 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 B3GNT5Q9BYG0 378 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 OSBPL6Q9BZF3 934 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 VRTNQ9H8Y1 702 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.37□□□□□ -0.271e-14■■■■■ 157
SMPD4-204ENST00000430682 GTSE1Q9NYZ3 720 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-204ENST00000430682 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
SMPD4-204ENST00000430682 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
SMPD4-204ENST00000430682 PIAS3Q9Y6X2 628 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 R4GN57 208 aa13.37□□□□□ -0.27
SMPD4-204ENST00000430682 OTOL1A6NHN0 477 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-204ENST00000430682 PHACTR2O75167 634 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 SP9P0CG40 484 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 NR2F2P24468 414 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 HOXC13P31276 330 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 RPL10AP62906 217 aaKnown RBP13.36□□□□□ -0.27
SMPD4-204ENST00000430682 TNNC1P63316 161 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 ORC1Q13415 861 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 NFIL3Q16649 462 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 ARHGAP15Q53QZ3 475 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 MON1AQ86VX9 555 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 HMGXB4Q9UGU5 601 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 EML5Q05BV3 1969 aa13.36□□□□□ -0.27
SMPD4-204ENST00000430682 LAMA1P25391 3075 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 F8VP50 259 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 GFRA3O60609 400 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 CCNE1P24864 410 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 ATICP31939 592 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 MCCD1P59942 119 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 NUCB2P80303 420 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 ZXDBP98169 803 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 GAS6Q14393 721 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 ZNF699Q32M78 642 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 TRIM68Q6AZZ1 485 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 TSSK4Q6SA08 328 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 ZNF852Q6ZMS4 543 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 YAF2Q8IY57 180 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 FAM83CQ9BQN1 747 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 GKN1Q9NS71 199 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
SMPD4-204ENST00000430682 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
SMPD4-204ENST00000430682 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 A8MXQ7 604 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
SMPD4-204ENST00000430682 FAM163BP0C2L3 166 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 CHRNB1P11230 501 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 GRIK1P39086 918 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 PRCPP42785 496 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 ASPAP45381 313 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 GCLMP48507 274 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 VAMP7P51809 220 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 AP3M2P53677 418 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 PMS1P54277 932 aaKnown RBP13.34□□□□□ -0.27
SMPD4-204ENST00000430682 MTAPQ13126 283 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 ZNF667Q5HYK9 610 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 CELF5Q8N6W0 485 aaKnown RBP13.34□□□□□ -0.27
SMPD4-204ENST00000430682 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 FAM3CQ92520 227 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 SPATA17Q96L03 361 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 BCO2Q9BYV7 579 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-204ENST00000430682 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
SMPD4-204ENST00000430682 MYO18AQ92614 2054 aaKnown RBP13.34□□□□□ -0.27
SMPD4-204ENST00000430682 CEP250Q9BV73 2442 aa13.33□□□□□ -0.27
SMPD4-204ENST00000430682 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 DPYSL4O14531 572 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms