RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 ZNF235Q14590 738 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 VCXQ9H320 206 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
PTCH1-207ENST00000429896 PNMA6AP0CW24 399 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 NOVP48745 357 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 GNGT1P63211 74 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 MAP7Q14244 749 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 TRIM60Q495X7 471 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 HABP4Q5JVS0 413 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ZNF618Q5T7W0 954 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SDE2Q6IQ49 451 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 PDCD6IPQ8WUM4 868 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 EXT2Q93063 718 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SLC35C1Q96A29 364 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SPG21Q9NZD8 308 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SMAD1Q15797 465 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 BMT2Q1RMZ1 405 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 CDKAL1Q5VV42 579 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 GLIS3Q8NEA6 775 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 KLC2Q9H0B6 622 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ADH1AP07327 375 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 NPAS4Q8IUM7 802 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 FSD1LQ9BXM9 530 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 CATSPERBQ9H7T0 1116 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 MMEP08473 750 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 TKTL1P51854 596 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 GCNT1Q02742 428 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ADGRG1Q9Y653 693 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 SPECC1L-ADORA2AF8WAN1 911 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 RFC2P35250 354 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 TUSC3Q13454 348 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 ITPRIPL1Q6GPH6 555 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-207ENST00000429896 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
PTCH1-207ENST00000429896 CHD4Q14839 1912 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 VGLL3A8MV65 326 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 M0R2N6 131 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 GYPCP04921 128 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 SYN1P17600 705 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 WSCD1Q658N2 575 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 PAEPP09466 180 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 TMEM253P0C7T8 217 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.24
PTCH1-207ENST00000429896 IFNAR2P48551 515 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 IRF5Q13568 498 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.24
PTCH1-207ENST00000429896 SLC9A9Q8IVB4 645 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 RCOR2Q8IZ40 523 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 LENG9Q96B70 501 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 STK39Q9UEW8 545 aa13.52□□□□□ -0.24
PTCH1-207ENST00000429896 S100BP04271 92 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 MIB1Q86YT6 1006 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 GIPC2Q8TF65 315 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 FAF2Q96CS3 445 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 M0QYT0 321 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 DR1Q01658 176 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 TSNAXIP1Q2TAA8 658 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 ATP8B1O43520 1251 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 F2P00734 622 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 CKBP12277 381 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 GARSP41250 739 aaKnown RBP13.52□□□□□ -0.25
PTCH1-207ENST00000429896 ROR1Q01973 937 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 MCL1Q07820 350 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 DDIT4Q9NX09 232 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 TSPAN16Q9UKR8 245 aa13.52□□□□□ -0.25
PTCH1-207ENST00000429896 F8VZ95 297 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 F8W8V4 182 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 ADAMTS3O15072 1205 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 CYBAP13498 195 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 GUCY2DQ02846 1103 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 EFEMP1Q12805 493 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 PSMD5Q16401 504 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 ANO4Q32M45 955 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 UNC93AQ86WB7 457 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 CHP1Q99653 195 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 DLG4P78352 724 aa13.51□□□□□ -0.25
PTCH1-207ENST00000429896 IL31Q6EBC2 164 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms