RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 STX7O15400 261 aaKnown RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 F9P00740 461 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 DNTTP04053 509 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 APODP05090 189 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 AMD1P17707 334 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 MUTP22033 750 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 OR1D2P34982 312 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 LAMB3Q13751 1172 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 HIC1Q14526 733 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SLC39A12Q504Y0 691 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 TPGS1Q6ZTW0 290 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 JAMLQ86YT9 394 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 CPA6Q8N4T0 437 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF513Q8N8E2 541 aaPredicted RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 PPP1R16AQ96I34 528 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 TCF25Q9BQ70 676 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 WDCPQ9H6R7 721 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 DNAJC18Q9H819 358 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 UTP6Q9NYH9 597 aaKnown RBP7.57□□□□□ -1.2
CNOT4-206ENST00000428680 MID2Q9UJV3 735 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 SLC39A10Q9ULF5 831 aa7.57□□□□□ -1.2
CNOT4-206ENST00000428680 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CCDC78A2IDD5 438 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 C1QTNF3-AMACRE9PGA6 284 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CBX4O00257 560 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 NDUFS3O75489 264 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 LUC7L3O95232 432 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 HLA-DRAP01903 254 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 HTR1BP28222 390 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CHKAP35790 457 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 HALP42357 657 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ADKP55263 362 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 DMWDQ09019 674 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GOLGA7BQ2TAP0 167 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 C8orf34Q49A92 452 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ANKRD20A3Q5VUR7 823 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PTRHD1Q6GMV3 140 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ACOT1Q86TX2 421 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 USP33Q8TEY7 942 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PCDHB2Q9Y5E7 798 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 COL1A2P08123 1366 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PODXLO00592 558 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PDXKO00764 312 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GRAP2O75791 330 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 FGF19O95750 216 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ADH1CP00326 375 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 MLH1P40692 756 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 VCPP55072 806 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 NNTQ13423 1086 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 E4F1Q66K89 784 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TMC5Q6UXY8 1006 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TDRD5Q8NAT2 981 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ATP11CQ8NB49 1132 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 FAM71BQ8TC56 605 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 RUNDC3BQ96NL0 473 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 REEP2Q9BRK0 252 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PI4K2AQ9BTU6 479 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ZMYND12Q9H0C1 365 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 POLMQ9NP87 494 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 KRT82Q9NSB4 513 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PCDHGB4Q9UN71 923 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CNTNAP2Q9UHC6 1331 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CDK5RAP2Q96SN8 1893 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CCDC151A5D8V7 595 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 EEF2KO00418 725 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 SPATA31D3P0C874 917 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TAC1P20366 129 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CTGFP29279 349 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 SREBF1P36956 1147 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF131P52739 623 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 RWDD2BP57060 319 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PHEXP78562 749 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TAP1Q03518 808 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 MDH1BQ5I0G3 518 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 SPATA31D4Q6ZUB0 917 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 RBBP8NLQ8NC74 664 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TTC8Q8TAM2 541 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 BADQ92934 168 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 FAM122AQ96E09 287 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 INTS2Q9H0H0 1204 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 DEC1Q9P2X7 70 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 NFU1Q9UMS0 254 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 FIS1Q9Y3D6 152 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 SIPA1L1O43166 1804 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TPRP12270 2363 aaKnown RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 IFRD1O00458 451 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 MCF2P10911 925 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GUCY2CP25092 1073 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GRSF1Q12849 480 aaKnown RBP eCLIP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 SYT10Q6XYQ8 523 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF438Q7Z4V0 828 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 CDKL3Q8IVW4 592 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GUF1Q8N442 669 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms