RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 F13A1P00488 732 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
SEC13-210ENST00000428626 DLATP10515 647 aaKnown RBP16.61■□□□□ 0.25
SEC13-210ENST00000428626 BDNFP23560 247 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 MAGEA11P43364 429 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CYP2J2P51589 502 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CACNA2D1P54289 1103 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 ZXDBP98169 803 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CUL4BQ13620 913 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
SEC13-210ENST00000428626 PPP2R5DQ14738 602 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 SURF1Q15526 300 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 PRR23BQ6ZRT6 265 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 STXBP4Q6ZWJ1 553 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
SEC13-210ENST00000428626 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
SEC13-210ENST00000428626 CCDC127Q96BQ5 260 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 CDH9Q9ULB4 789 aa16.61■□□□□ 0.25
SEC13-210ENST00000428626 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 TRDMT1O14717 391 aaKnown RBP16.6■□□□□ 0.25
SEC13-210ENST00000428626 EGFP01133 1207 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 AFMP43652 599 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 PXNP49023 591 aaPredicted RBP16.6■□□□□ 0.25
SEC13-210ENST00000428626 AMPD3Q01432 767 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 USP4Q13107 963 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 MTF1Q14872 753 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 PSMD6Q15008 389 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 BMT2Q1RMZ1 405 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 LONP2Q86WA8 852 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
SEC13-210ENST00000428626 UXTQ9UBK9 157 aaPredicted RBP16.6■□□□□ 0.25
SEC13-210ENST00000428626 WNT6Q9Y6F9 365 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
SEC13-210ENST00000428626 EML5Q05BV3 1969 aa16.6■□□□□ 0.25
SEC13-210ENST00000428626 MYO16Q9Y6X6 1858 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 ANTXRLA6NF34 631 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 KLRC4O43908 158 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 HOXA6P31267 233 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 GJA4P35212 333 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 CASP4P49662 377 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 GALK1P51570 392 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
SEC13-210ENST00000428626 MYL6P60660 151 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 SIM2Q14190 667 aaPredicted RBP16.59■□□□□ 0.25
SEC13-210ENST00000428626 LAIR1Q6GTX8 287 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 SYNPOQ8N3V7 929 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 SPATA17Q96L03 361 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 XYLT2Q9H1B5 865 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 LINC00597Q9H2U6 94 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 USP18Q9UMW8 372 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.59■□□□□ 0.25
SEC13-210ENST00000428626 UBE4BO95155 1302 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 SPAG17Q6Q759 2223 aa16.59■□□□□ 0.25
SEC13-210ENST00000428626 RALGAPA1Q6GYQ0 2036 aa16.58■□□□□ 0.25
SEC13-210ENST00000428626 TRAV19A0A0A6YYK7 116 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 TACC1O75410 805 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 CKMP06732 381 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 TNNI1P19237 187 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
SEC13-210ENST00000428626 EML3Q32P44 896 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 MDH1BQ5I0G3 518 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 VSTM1Q6UX27 236 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 C4orf50Q6ZRC1 276 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 WDR5BQ86VZ2 330 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 C12orf56Q8IXR9 622 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.24
SEC13-210ENST00000428626 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 MYCBPAPQ8TBZ2 947 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 OSCP1Q8WVF1 389 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 SECISBP2LQ93073 1101 aaKnown RBP16.58■□□□□ 0.24
SEC13-210ENST00000428626 ECT2Q9H8V3 914 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 MAGEF1Q9HAY2 307 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 SERTAD1Q9UHV2 236 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 KIAA1549LQ6ZVL6 1849 aa16.58■□□□□ 0.24
SEC13-210ENST00000428626 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 F8VP50 259 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 CLDN5O00501 218 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 ACTN4O43707 911 aaKnown RBP16.57■□□□□ 0.24
SEC13-210ENST00000428626 RNF40O75150 1001 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 RETP07949 1114 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 USP17L7P0C7H9 530 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 GNL1P36915 607 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms