RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 CNTN3Q9P232 1028 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 PCSK1NQ9UHG2 260 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 E5RJQ4 531 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 RGS16O15492 202 aaPredicted RBP14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 RNF8O76064 485 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 ACSL3O95573 720 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 PFKMP08237 780 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 VCPP55072 806 aaKnown RBP14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 DYNLT1P63172 113 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 P3H1Q32P28 736 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 C17orf99Q6UX52 265 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 ALKAL1Q6UXT8 129 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 FAM183BPQ6ZVS7 135 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 CROCCP2Q86T23 111 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 ALLCQ8N6M5 410 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 LRRC52Q8N7C0 313 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 CCHCR1Q8TD31 782 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 EPS8L3Q8TE67 593 aaKnown RBP14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 TMEM40Q8WWA1 233 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 SLC12A6Q9UHW9 1150 aa14.72□□□□□ -0.05
APOBEC3D-202ENST00000427494 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 GPD1P21695 349 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 KDELR1P24390 212 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 RGS7P49802 495 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 PTGISQ16647 500 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 C6orf118Q5T5N4 469 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 PPP1R26Q5T8A7 1209 aaPredicted RBP14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 C9orf57Q5W0N0 161 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 PWWP2AQ96N64 755 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 APBA2Q99767 749 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 TMEM109Q9BVC6 243 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 KATNAL1Q9BW62 490 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 MIS12Q9H081 205 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 FAM49BQ9NUQ9 324 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 ASNSD1Q9NWL6 643 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 KLK14Q9P0G3 267 aa14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 UBQLN1Q9UMX0 589 aaKnown RBP14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 DRG1Q9Y295 367 aaKnown RBP14.71□□□□□ -0.05
APOBEC3D-202ENST00000427494 RASGRF2O14827 1237 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 TRUB2O95900 331 aaKnown RBP14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 ETS1P14921 441 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 MIPP30301 263 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLCO1A2P46721 670 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 CCT5P48643 541 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 ARSEP51690 589 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 ACAP1Q15027 740 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 OASLQ15646 514 aaKnown RBP14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 GLIS1Q8NBF1 620 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 KCTD6Q8NC69 237 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 OR6B3Q8NGW1 331 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 HSPH1Q92598 858 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 EPN3Q9H201 632 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 NMRK2Q9NPI5 230 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 USP18Q9UMW8 372 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 Q9Y3F1 56 aa14.71□□□□□ -0.06
APOBEC3D-202ENST00000427494 CD48P09326 243 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZSCAN5DPP0CG00 497 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 PSMC4P43686 418 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 PLCB3Q01970 1234 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 FSCN1Q16658 493 aaKnown RBP14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 HIBCHQ6NVY1 386 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 RXFP2Q8WXD0 754 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 SOCS4Q8WXH5 440 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 PIWIL1Q96J94 861 aaKnown RBP14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 GJD2Q9UKL4 321 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 EFR3BQ9Y2G0 817 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 NME7Q9Y5B8 376 aa14.7□□□□□ -0.06
APOBEC3D-202ENST00000427494 C2CD4BA6NLJ0 364 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TULP2O00295 520 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 NDUFAB1O14561 156 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TNPO2O14787 897 aaKnown RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CST8O60676 142 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 GRAP2O75791 330 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TTC4O95801 387 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 AGTP01019 485 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ITGAVP06756 1048 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PDGFRAP16234 1089 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 OTUD4Q01804 1114 aaKnown RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 GPS1Q13098 491 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TAF5Q15542 800 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SOWAHAQ2M3V2 549 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TRNP1Q6NT89 227 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TTC30AQ86WT1 665 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PEBP4Q96S96 227 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TMEM121Q9BTD3 319 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CNOT10Q9H9A5 744 aaKnown RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 A8MXQ7 604 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SGK1O00141 431 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CD4P01730 458 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms