RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 K7ELQ4 463 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 KIAA0391O15091 583 aaKnown RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 SPTLC2O15270 562 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 PPP6R2O75170 966 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 CST3P01034 146 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 WARSP23381 471 aaKnown RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 PCSK1P29120 753 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 CNR2P34972 360 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 MAGEA11P43364 429 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 PXNP49023 591 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 GALK1P51570 392 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 ZXDBP98169 803 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 EHHADHQ08426 723 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 USP4Q13107 963 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 MTF1Q14872 753 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 STK38Q15208 465 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 CNNM4Q6P4Q7 775 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 SPATA2LQ8IUW3 424 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 SCN4BQ8IWT1 228 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 ZNF507Q8TCN5 953 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 MYLPFQ96A32 169 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 DHX58Q96C10 678 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 FUBP3Q96I24 572 aaKnown RBP eCLIP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 ANKRD36BP1Q96IX9 119 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 SYT15Q9BQS2 421 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 MRPL45Q9BRJ2 306 aaKnown RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 BACH2Q9BYV9 841 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 GZF1Q9H116 711 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 TRPC7Q9HCX4 862 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 AGPAT3Q9NRZ7 376 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 SEMA4GQ9NTN9 838 aa10.76□□□□□ -0.69
GACAT3-201ENST00000426539 UXTQ9UBK9 157 aaPredicted RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 CDV3Q9UKY7 258 aaKnown RBP10.76□□□□□ -0.69
GACAT3-201ENST00000426539 NCOR2Q9Y618 2525 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 EIF3DO15371 548 aaKnown RBP eCLIP10.75□□□□□ -0.69
GACAT3-201ENST00000426539 LRP3O75074 770 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 TNNC2P02585 160 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 PDGFRBP09619 1106 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 BDNFP23560 247 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 CASP1P29466 404 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 GJA4P35212 333 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 USP46P62068 366 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 ASIC1P78348 528 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 GRSF1Q12849 480 aaKnown RBP eCLIP10.75□□□□□ -0.69
GACAT3-201ENST00000426539 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 PDGFRLQ15198 375 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 CSRP2Q16527 193 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 DUOXA2Q1HG44 320 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 EML3Q32P44 896 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
GACAT3-201ENST00000426539 PRR23CQ6ZRP0 262 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 DPH6Q7L8W6 267 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.75□□□□□ -0.69
GACAT3-201ENST00000426539 WDR49Q8IV35 697 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 ARL14EPQ8N8R7 260 aaPredicted RBP10.75□□□□□ -0.69
GACAT3-201ENST00000426539 OSCP1Q8WVF1 389 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 SCFD1Q8WVM8 642 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 C7orf25Q9BPX7 421 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 RTKNQ9BST9 563 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 CUEDC2Q9H467 287 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 ECT2Q9H8V3 914 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 CDH9Q9ULB4 789 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 WNT6Q9Y6F9 365 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 WDR87Q6ZQQ6 2873 aa10.75□□□□□ -0.69
GACAT3-201ENST00000426539 TCHHQ07283 1943 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 TRAV19A0A0A6YYK7 116 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.74□□□□□ -0.69
GACAT3-201ENST00000426539 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 ANTXRLA6NF34 631 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SLC30A4O14863 429 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 CLIC2O15247 247 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 GDF9O60383 454 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 CUTAO60888 179 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 RNF40O75150 1001 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 YEATS4O95619 227 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 USP17L7P0C7H9 530 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 TCF3P15923 654 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SDHBP21912 280 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 CACNA2D1P54289 1103 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 CYP24A1Q07973 514 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 PSMD6Q15008 389 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SURF1Q15526 300 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SNRNP35Q16560 246 aaKnown RBP10.74□□□□□ -0.69
GACAT3-201ENST00000426539 GAB4Q2WGN9 574 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 STXBP4Q6ZWJ1 553 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 CEP68Q76N32 757 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 NELFCDQ8IXH7 590 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 RDH13Q8NBN7 331 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SH3RF2Q8TEC5 729 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 GAB3Q8WWW8 586 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 PCED1BQ96HM7 432 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 SPATA17Q96L03 361 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 P2RY13Q9BPV8 354 aa10.74□□□□□ -0.69
GACAT3-201ENST00000426539 LRRC27Q9C0I9 530 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms