RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TCF3P15923 654 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 DUOXA2Q1HG44 320 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SDHAF4Q5VUM1 108 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TDRD10Q5VZ19 366 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SLC39A4Q6P5W5 647 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TMEM150AQ86TG1 271 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 BRSK2Q8IWQ3 736 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PNKPQ96T60 521 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SNX25Q9H3E2 840 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 F5P12259 2224 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TICRRQ7Z2Z1 1910 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GPR179Q6PRD1 2367 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ADH1CP00326 375 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FAM163BP0C2L3 166 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CSRP1P21291 193 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ACAT1P24752 427 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GPR15P49685 360 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FOXC1Q12948 553 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ZNF77Q15935 545 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EML3Q32P44 896 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 UAP1L1Q3KQV9 507 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ANO7Q6IWH7 933 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 HS2ST1Q7LGA3 356 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRMT11Q7Z4G4 463 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PIGKQ92643 395 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FBRSL1Q9HCM7 1045 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TMLHEQ9NVH6 421 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CITO14578 2027 aa13.12□□□□□ -0.31
HLA-DQB3-203ENST00000425319 OTOL1A6NHN0 477 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SEC13P55735 322 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 AMPD3Q01432 767 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ZNF252P-AS1Q0IIN9 211 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CRY1Q16526 586 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 USP33Q8TEY7 942 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 LINC00597Q9H2U6 94 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TBC1D7Q9P0N9 293 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GABRDO14764 452 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 DCLK1O15075 740 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CLSTN1O94985 981 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EIF2DP41214 584 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 STAT6P42226 847 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TNFRSF4P43489 277 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 GAD2Q05329 585 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 USP4Q13107 963 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRPC3Q13507 836 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 FAM171BQ6P995 826 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 UNQ6494/PRO21346Q6UXR6 183 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
HLA-DQB3-203ENST00000425319 VPS37CA5D8V6 355 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms