RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 GARTP22102 1010 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 SCP2P22307 547 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 PAX3P23760 479 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 RPL9P32969 192 aaKnown RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 MCM7P33993 719 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 OR1D2P34982 312 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 TRAPPC10P48553 1259 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 NEK4P51957 841 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 SOX4Q06945 474 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 CAPSQ13938 189 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 PUM1Q14671 1186 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS8-205ENST00000424721 KYAT1Q16773 422 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 RSPO4Q2I0M5 234 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 PABPC1LQ4VXU2 614 aaKnown RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 AXDND1Q5T1B0 1012 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 CYP4A22Q5TCH4 519 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 IQCEQ6IPM2 695 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 FBXL19Q6PCT2 694 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 C1orf228Q6PIY5 440 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 ZNF852Q6ZMS4 543 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 BNC2Q6ZN30 1099 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 GET4Q7L5D6 327 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 MAEAQ7L5Y9 396 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 GRASPQ7Z6J2 395 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 CATSPER3Q86XQ3 398 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 DIS3L2Q8IYB7 885 aaKnown RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 RNF168Q8IYW5 571 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 FAM184AQ8NB25 1140 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 APPL2Q8NEU8 664 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 LNX1Q8TBB1 728 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 E2F7Q96AV8 911 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 ZNF707Q96C28 371 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 WDR89Q96FK6 387 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 ZSCAN31Q96LW9 406 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 ZNF512Q96ME7 567 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 MTMR9Q96QG7 549 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 MYADMQ96S97 322 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 TSPAN18Q96SJ8 248 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 CLSTN3Q9BQT9 956 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 LLPHQ9BRT6 129 aaKnown RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 TCHPQ9BT92 498 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 TIPINQ9BVW5 301 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 GPR88Q9GZN0 384 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 FOXP1Q9H334 677 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 C17orf75Q9HAS0 396 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 MARCH5Q9NX47 278 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 SNTG2Q9NY99 539 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 WRAP73Q9P2S5 460 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 CDH22Q9UJ99 828 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 RAB23Q9ULC3 237 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 MRPS23Q9Y3D9 190 aaKnown RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 BACE2Q9Y5Z0 518 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 ZFHX2Q9C0A1 2572 aaPredicted RBP5.84□□□□□ -1.47
VPS8-205ENST00000424721 MYO10Q9HD67 2058 aa5.84□□□□□ -1.47
VPS8-205ENST00000424721 PTPRZ1P23471 2315 aaPredicted RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 ARHGEF37A1IGU5 675 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 CCDC169A6NNP5 214 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 PRR5-ARHGAP8B1AHC4 643 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 TMEM189-UBE2V1I3L0A0 370 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 LAD1O00515 517 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 PRRG1O14668 218 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 SYN3O14994 580 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 XPOTO43592 962 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 NARSO43776 548 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 TBC1D4O60343 1298 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 FOXD2O60548 495 aaPredicted RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 GREM1O60565 184 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 ECI2O75521 394 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 C8AP07357 584 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 DCNP07585 359 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 SP9P0CG40 484 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 DRD2P14416 443 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 GLULP15104 373 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 DNAJA1P31689 397 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 ABCD1P33897 745 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 CCT6AP40227 531 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 PREPP48147 710 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 GPC5P78333 572 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 HMGN5P82970 282 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 ARHGAP8P85298 464 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 STRN3Q13033 797 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 SNW1Q13573 536 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 HTR4Q13639 388 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 COL9A2Q14055 689 aaPredicted RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 UBXN2BQ14CS0 331 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 MLF2Q15773 248 aaPredicted RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 ZC3H12AQ5D1E8 599 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 NKAPLQ5M9Q1 402 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 ATF7IP2Q5U623 682 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 ERICH6BQ5W0A0 696 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 KRT79Q5XKE5 535 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 TPGS2Q68CL5 300 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 CWF19L1Q69YN2 538 aaKnown RBP5.83□□□□□ -1.48
VPS8-205ENST00000424721 DGLUCYQ7Z3D6 616 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 REC114Q7Z4M0 266 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 ARMC10Q8N2F6 343 aa5.83□□□□□ -1.48
VPS8-205ENST00000424721 LEMD2Q8NC56 503 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms