RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SYAP1Q96A49 352 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 MTFMTQ96DP5 389 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PAIP2Q9BPZ3 127 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 POLR3CQ9BUI4 534 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PAIP1Q9H074 479 aaKnown RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 KCTD10Q9H3F6 313 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 PCIF1Q9H4Z3 704 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 RABEP2Q9H5N1 569 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SERHLQ9NQF3 203 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SRRDQ9UH36 339 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 SH3BGRL2Q9UJC5 107 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 RPS6KA6Q9UK32 745 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 COG5Q9UP83 839 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 ATP23Q9Y6H3 246 aa4.06□□□□□ -1.76
SF3B1-205ENST00000424674 EPN1Q9Y6I3 576 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-205ENST00000424674 A0A088AWK7 358 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ERICH4A6NGS2 130 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 DDX39AO00148 427 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SCDO00767 359 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 AP3D1O14617 1153 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SLC16A6O15403 523 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 AKAP8O43823 692 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 CUTAO60888 179 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SRGAP2O75044 1071 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF623O75123 536 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KRT37O76014 449 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SLU7O95391 586 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF888P0CJ79 500 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SFTPCP11686 197 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 HLA-DPA1P20036 260 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 TACR2P21452 398 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 GJA4P35212 333 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 NNMTP40261 264 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 TRPC1P48995 793 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SLC12A2P55011 1212 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 POLE2P56282 527 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 IFI35P80217 286 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 MRPS9P82933 396 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 PPARDQ03181 441 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SEMA3AQ14563 771 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 UBE3CQ15386 1083 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 CRY1Q16526 586 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KLHDC7AQ5VTJ3 777 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 MBNL2Q5VZF2 373 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 RAB12Q6IQ22 244 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KDELC1Q6UW63 502 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 CCBE1Q6UXH8 406 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 EP400NLQ6ZTU2 488 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 C16orf59Q7L2K0 433 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 BEND5Q7L4P6 421 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 GDAP1Q8TB36 358 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 FBXO30Q8TB52 745 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 BICD2Q8TD16 824 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 DENND1AQ8TEH3 1009 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF606Q8WXB4 792 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 THAP4Q8WY91 577 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ANKS1AQ92625 1134 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KIF1BPQ96EK5 621 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 RAX2Q96IS3 184 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 MSLNLQ96KJ4 702 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 UROC1Q96N76 676 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 LRRC37BQ96QE4 947 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 LMF1Q96S06 567 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 HEPHQ9BQS7 1158 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 TRIM5Q9C035 493 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 DNAI2Q9GZS0 605 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 QRSL1Q9H0R6 528 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SEMA4AQ9H3S1 761 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 ERVMER34-1Q9H9K5 563 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 SMURF1Q9HCE7 757 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 EIF2B3Q9NR50 452 aaKnown RBP4.05□□□□□ -1.76
SF3B1-205ENST00000424674 TBCCD1Q9NVR7 557 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 TMEM160Q9NX00 188 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KCTD5Q9NXV2 234 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 MYO1AQ9UBC5 1043 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 PCSK1NQ9UHG2 260 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 FEM1BQ9UK73 627 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 KIF3AQ9Y496 699 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 DTNAQ9Y4J8 743 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 PCDHGB5Q9Y5G0 923 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 NR2E3Q9Y5X4 410 aa4.05□□□□□ -1.76
SF3B1-205ENST00000424674 A0A0B4J269 797 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 SLC12A8A0AV02 714 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 PRAMEF25A6NGN4 478 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 NT5C1B-RDH14C9J2C7 533 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ARHGAP6O43182 974 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 MTSS1O43312 755 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 SLC22A3O75751 556 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 KIAA0754O94854 1291 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 RPLP2P05387 115 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ITGA5P08648 1049 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TNNT1P13805 278 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 BRAFP15056 766 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CTSSP25774 331 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 KRT2P35908 639 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ARL3P36405 182 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 HADHAP40939 763 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CCR9P51686 369 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms