RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 NAIF1Q69YI7 327 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 ADALQ6DHV7 355 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 LRRC52Q8N7C0 313 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
RPUSD3-204ENST00000424438 FAM221BA6H8Z2 402 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 ALDH1A2O94788 518 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 CKMP06732 381 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 OPRD1P41143 372 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 MYL7Q01449 175 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 CRY1Q16526 586 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 INTS6LQ5JSJ4 861 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 PEAR1Q5VY43 1037 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 CRELD2Q6UXH1 353 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 PI4K2AQ9BTU6 479 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 SLC32A1Q9H598 525 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 BLOC1S4Q9NUP1 217 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 MAGED2Q9UNF1 606 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 MSRB2Q9Y3D2 182 aa16.72■□□□□ 0.27
RPUSD3-204ENST00000424438 A0A0A0MRY4 1105 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 VWA3AA6NCI4 1184 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 ANKRD63C9JTQ0 380 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 K7EQS6 105 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 GABRDO14764 452 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 HYAL3O43820 417 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 PCSK1P29120 753 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 P2RY2P41231 377 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 LHX1P48742 406 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 IRX4P78413 519 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 BYSLQ13895 437 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 UAP1L1Q3KQV9 507 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 LMBRD2Q68DH5 695 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 PIP4P1Q86T03 277 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 SH3RF2Q8TEC5 729 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 SLC22A12Q96S37 553 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 NUSAP1Q9BXS6 441 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 L1RE1Q9UN81 338 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 WNT6Q9Y6F9 365 aa16.71■□□□□ 0.27
RPUSD3-204ENST00000424438 H0Y626 953 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 HUS1O60921 280 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 PPP1R37O75864 691 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 TRIM16O95361 564 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 BCKDHBP21953 392 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 PPP3CCP48454 512 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 GPR15P49685 360 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 KCNB1Q14721 858 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 DDR2Q16832 855 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 SOWAHCQ53LP3 525 aaPredicted RBP16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 VSTM1Q6UX27 236 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 LPCAT2Q7L5N7 544 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 SYT12Q8IV01 421 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 TOP6BLQ8N6T0 577 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 DEFB124Q8NES8 71 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 SPACA7Q96KW9 195 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 ASH1LQ9NR48 2969 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 ITPR1Q14643 2758 aa16.7■□□□□ 0.26
RPUSD3-204ENST00000424438 NBEAQ8NFP9 2946 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 PATE3B3GLJ2 98 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 SEC24BO95487 1268 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 BMP15O95972 392 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 HDCP19113 662 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 CYP2F1P24903 491 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 UBA7P41226 1012 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 SLC7A9P82251 487 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 PSMD2Q13200 908 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 SEMA3BQ13214 749 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 HNRNPDQ14103 355 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 FAM171BQ6P995 826 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 PDZD3Q86UT5 571 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 BRSK2Q8IWQ3 736 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 WHAMMQ8TF30 809 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 RAD54LQ92698 747 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 CYP2S1Q96SQ9 504 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 PLIN2Q99541 437 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 TTLL2Q9BWV7 592 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 STRA6Q9BX79 667 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 SEL1LQ9UBV2 794 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 HELZ2Q9BYK8 2649 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-204ENST00000424438 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 ACACAQ13085 2346 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms