RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 KCNH7Q9NS40 1196 aa13.52□□□□□ -0.24
TOP2B-203ENST00000424225 SLC17A6Q9P2U8 582 aa13.52□□□□□ -0.24
TOP2B-203ENST00000424225 ZNF212Q9UDV6 495 aa13.52□□□□□ -0.24
TOP2B-203ENST00000424225 CCDC195A0A1B0GUA6 201 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 CDK7P50613 346 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 CYP24A1Q07973 514 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 GRM2Q14416 872 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 EXD1Q8NHP7 514 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 TTC17Q96AE7 1141 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 BICD1Q96G01 975 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 ACSS3Q9H6R3 686 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 CLIC5Q9NZA1 410 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 PACSIN3Q9UKS6 424 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 ZNF148Q9UQR1 794 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 E7ESA3 106 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 ITM2AO43736 263 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 PRKCGP05129 697 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 DYNLT1P63172 113 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 UGT2A3Q6UWM9 527 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 ANO5Q75V66 913 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
TOP2B-203ENST00000424225 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.25
TOP2B-203ENST00000424225 TCRBV9S1A1TA0A576 114 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ZWINTO95229 277 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 PGM3O95394 542 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 C6orf222P0C671 652 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 NPTX2P47972 431 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 USP46P62068 366 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 SLC18A2Q05940 514 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 CUL3Q13618 768 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 CCDC6Q16204 474 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 SPOCD1Q6ZMY3 1216 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 POU5F2Q8N7G0 328 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 GRK7Q8WTQ7 553 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 VPS11Q9H270 941 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 DMAP1Q9NPF5 467 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ARHGEF35A5YM69 484 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 TMEM191CA6NGB0 347 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 STBD1O95210 358 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 F7P08709 466 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 TMEM191BP0C7N4 346 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 BST1Q10588 318 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 RHOT1Q8IXI2 618 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 PGLYRP2Q96PD5 576 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 FNBP1Q96RU3 617 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 SSU72Q9NP77 194 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 UBR3Q6ZT12 1888 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 PSTPIP1O43586 416 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 LYPLA1O75608 230 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 TM7SF2O76062 418 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 IFNB1P01574 187 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 EMP3P54852 163 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 FAM219BQ5XKK7 198 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 POTEAQ6S8J7 498 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ZNF398Q8TD17 642 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
TOP2B-203ENST00000424225 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
TOP2B-203ENST00000424225 RFPL1O75677 317 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 PDE5AO76074 875 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 TFAP2AP05549 437 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 MORF4L2Q15014 288 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 UNC5BQ8IZJ1 945 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 NMD3Q96D46 503 aaKnown RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 ZWILCHQ9H900 591 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 XPNPEP1Q9NQW7 623 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 NFIBO00712 420 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 SKIP12755 728 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 TLR1Q15399 786 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
TOP2B-203ENST00000424225 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
TOP2B-203ENST00000424225 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms