RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
USB1-202ENST00000423271 ANAPC1Q9H1A4 1944 aa16.23■□□□□ 0.19
USB1-202ENST00000423271 TACC1O75410 805 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 STAU1O95793 577 aaKnown RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 LMNAP02545 664 aaKnown RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 CHRNB1P11230 501 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 DDX6P26196 483 aaKnown RBP eCLIP16.22■□□□□ 0.19
USB1-202ENST00000423271 CTHP32929 405 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 MAGEA11P43364 429 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 MLLT6P55198 1093 aaPredicted RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 BIRC3Q13489 604 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 TRPC3Q13507 836 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 ZNF528Q3MIS6 628 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 KRBA2Q6ZNG9 492 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 MON1AQ86VX9 555 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 OR6B3Q8NGW1 331 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 PCED1BQ96HM7 432 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 SLC22A12Q96S37 553 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 SNX25Q9H3E2 840 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 SMYD3Q9H7B4 428 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 C8orf33Q9H7E9 229 aaPredicted RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 TRPC7Q9HCX4 862 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 RBM12Q9NTZ6 932 aaKnown RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 UXTQ9UBK9 157 aaPredicted RBP16.22■□□□□ 0.19
USB1-202ENST00000423271 ZMYM5Q9UJ78 669 aa16.22■□□□□ 0.19
USB1-202ENST00000423271 PHACTR2O75167 634 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 ZNF202O95125 648 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 VNN1O95497 513 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 NR3C1P04150 777 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 MYL1P05976 194 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 GNL1P36915 607 aaPredicted RBP16.21■□□□□ 0.19
USB1-202ENST00000423271 USP46P62068 366 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 DLG4P78352 724 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 DPYDQ12882 1025 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 GAS6Q14393 721 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
USB1-202ENST00000423271 TRIM68Q6AZZ1 485 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 VSTM1Q6UX27 236 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 SLC9A9Q8IVB4 645 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 FMR1NBQ8N0W7 255 aaPredicted RBP16.21■□□□□ 0.19
USB1-202ENST00000423271 MYCBPAPQ8TBZ2 947 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 MSANTD3Q96H12 275 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 SEMA4AQ9H3S1 761 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 HPS4Q9NQG7 708 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 TDP1Q9NUW8 608 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
USB1-202ENST00000423271 PDXKO00764 312 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
USB1-202ENST00000423271 PTPN1P18031 435 aaKnown RBP16.2■□□□□ 0.18
USB1-202ENST00000423271 ATICP31939 592 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 GRIK1P39086 918 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 RAP1GAPP47736 663 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 CACNA2D1P54289 1103 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 CLDN10P78369 228 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 NCOA4Q13772 614 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 PON2Q15165 354 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 ZNF699Q32M78 642 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 Q6ZS52 159 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 RALGPS2Q86X27 583 aaPredicted RBP16.2■□□□□ 0.18
USB1-202ENST00000423271 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 TMEM174Q8WUU8 243 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 NELL1Q92832 810 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 SYAP1Q96A49 352 aaPredicted RBP16.2■□□□□ 0.18
USB1-202ENST00000423271 CYP2S1Q96SQ9 504 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 FAM83CQ9BQN1 747 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 KIF9Q9HAQ2 790 aa16.2■□□□□ 0.18
USB1-202ENST00000423271 THG1LQ9NWX6 298 aaKnown RBP16.2■□□□□ 0.18
USB1-202ENST00000423271 C2orf78A6NCI8 922 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 OTOL1A6NHN0 477 aaPredicted RBP16.19■□□□□ 0.18
USB1-202ENST00000423271 A8MXQ7 604 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 F8VP50 259 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 KINO60870 393 aaKnown RBP16.19■□□□□ 0.18
USB1-202ENST00000423271 RHOBTB3O94955 611 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 CLSTN1O94985 981 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 TDGF1P13385 188 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 ARSAP15289 507 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 CDH8P55286 799 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 SATB1Q01826 763 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 ITPRIPL2Q3MIP1 535 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 C1orf220Q5T0J3 134 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 CEP135Q66GS9 1140 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 SUMF1Q8NBK3 374 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 ZBTB44Q8NCP5 570 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 B3GALNT2Q8NCR0 500 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 SPATA17Q96L03 361 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 ZNF518BQ9C0D4 1074 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 EBF3Q9H4W6 596 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 VRTNQ9H8Y1 702 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 ZSCAN32Q9NX65 697 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 GCNT4Q9P109 453 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms