RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ADAM9Q13443 819 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 PDGFRLQ15198 375 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 DDR2Q16832 855 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 ZACNQ401N2 412 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 COBLL1Q53SF7 1204 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
MDC1-204ENST00000422266 UNC93AQ86WB7 457 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
MDC1-204ENST00000422266 MAB21L3Q8N8X9 362 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 B3GALNT2Q8NCR0 500 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 STKLD1Q8NE28 680 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 PDZD8Q8NEN9 1154 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 ST13P5Q8NFI4 369 aaPredicted RBP9.22□□□□□ -0.93
MDC1-204ENST00000422266 KBTBD7Q8WVZ9 684 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 OVCA2Q8WZ82 227 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 SECISBP2LQ93073 1101 aaKnown RBP9.22□□□□□ -0.93
MDC1-204ENST00000422266 MYLPFQ96A32 169 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 PCED1BQ96HM7 432 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 C8orf48Q96LL4 319 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 TSG101Q99816 390 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 SLC46A2Q9BY10 475 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 IL21Q9HBE4 155 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 TMLHEQ9NVH6 421 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 COMMD8Q9NX08 183 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 TRPM5Q9NZQ8 1165 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
MDC1-204ENST00000422266 PCDHGA2Q9Y5H1 932 aa9.22□□□□□ -0.93
MDC1-204ENST00000422266 LRRIQ3A6PVS8 624 aaPredicted RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 ARNTLO00327 626 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 CETN3O15182 167 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 KINO60870 393 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 LMNAP02545 664 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 SP9P0CG40 484 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 EPB41P11171 864 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 TCF3P15923 654 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 BDNFP23560 247 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 LMO2P25791 158 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 PIK3CAP42336 1068 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 MYL6P60660 151 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 PSMC1P62191 440 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 CYP4F8P98187 520 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 MDH1BQ5I0G3 518 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 SV2AQ7L0J3 742 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 OSTM1Q86WC4 334 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 DDX42Q86XP3 938 aaKnown RBP eCLIP9.21□□□□□ -0.94
MDC1-204ENST00000422266 FAM186BQ8IYM0 893 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 ATRIPQ8WXE1 791 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 ATP2A3Q93084 1043 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 SMARCD1Q96GM5 515 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 TTLL2Q9BWV7 592 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 CHRDQ9H2X0 955 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 FAM86C1Q9NVL1 165 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 NDRG2Q9UN36 371 aaKnown RBP9.21□□□□□ -0.94
MDC1-204ENST00000422266 F5P12259 2224 aa9.21□□□□□ -0.94
MDC1-204ENST00000422266 PRR23AA6NEV1 266 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 SPECC1L-ADORA2AF8WAN1 911 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 SLC9A3R1O14745 358 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 ATG13O75143 517 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 ASS1P00966 412 aaKnown RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 CKMP06732 381 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 HDCP19113 662 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 CD72P21854 359 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 CCNE1P24864 410 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 CTHP32929 405 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 GRSF1Q12849 480 aaKnown RBP eCLIP9.2□□□□□ -0.94
MDC1-204ENST00000422266 RUNX3Q13761 415 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 FBXO43Q4G163 708 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 PREPLQ4J6C6 727 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 STXBP5Q5T5C0 1151 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 ZNF658Q5TYW1 1059 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 KRT39Q6A163 491 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 TXNDC8Q6A555 127 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 POTEHQ6S545 545 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 CPA6Q8N4T0 437 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 MRPL45Q9BRJ2 306 aaKnown RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 FBXO44Q9H4M3 255 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 LMAN1LQ9HAT1 526 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 TMEM8AQ9HCN3 771 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 TRPC7Q9HCX4 862 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 CRTAC1Q9NQ79 661 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 GKN1Q9NS71 199 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 ZSCAN32Q9NX65 697 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
MDC1-204ENST00000422266 MIA3Q5JRA6 1907 aa9.2□□□□□ -0.94
MDC1-204ENST00000422266 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms