RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 NFIL3Q16649 462 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 ZACNQ401N2 412 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 C1orf220Q5T0J3 134 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 FAM186BQ8IYM0 893 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 CSGALNACT1Q8TDX6 532 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 MRPS31Q92665 395 aaKnown RBP12.13□□□□□ -0.47
GGCX-202ENST00000421496 ZFYVE19Q96K21 471 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 GSDMAQ96QA5 445 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 CYP2S1Q96SQ9 504 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 NELL2Q99435 816 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 BCO2Q9BYV7 579 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 TRPV5Q9NQA5 729 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.47
GGCX-202ENST00000421496 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 RMND1Q9NWS8 449 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
GGCX-202ENST00000421496 UXTQ9UBK9 157 aaPredicted RBP12.13□□□□□ -0.47
GGCX-202ENST00000421496 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
GGCX-202ENST00000421496 MRPS17Q9Y2R5 130 aaKnown RBP12.13□□□□□ -0.47
GGCX-202ENST00000421496 ARNTLO00327 626 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 CLDN5O00501 218 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 MAN2B1O00754 1011 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 MAPK13O15264 365 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 NCAM2O15394 837 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 HLA-DRAP01903 254 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 TRIM49P0CI25 452 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 KRT13P13646 458 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 WEE1P30291 646 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 GCLMP48507 274 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 KPNA1P52294 538 aaPredicted RBP12.12□□□□□ -0.47
GGCX-202ENST00000421496 ZCWPW2Q504Y3 356 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 ARHGAP29Q52LW3 1261 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
GGCX-202ENST00000421496 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 SPOPLQ6IQ16 392 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
GGCX-202ENST00000421496 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 C1orf210Q8IVY1 113 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 CELF5Q8N6W0 485 aaKnown RBP12.12□□□□□ -0.47
GGCX-202ENST00000421496 B3GALNT2Q8NCR0 500 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 TTC8Q8TAM2 541 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 FAM3CQ92520 227 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 TRMT2BQ96GJ1 504 aaKnown RBP12.12□□□□□ -0.47
GGCX-202ENST00000421496 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 SDCBP2Q9H190 292 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 GKN1Q9NS71 199 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 TDP1Q9NUW8 608 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 ZMYM5Q9UJ78 669 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 CCL26Q9Y258 94 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 PIAS3Q9Y6X2 628 aa12.12□□□□□ -0.47
GGCX-202ENST00000421496 MYOFQ9NZM1 2061 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 F8VP50 259 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TADA3O75528 432 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 SMC2O95347 1197 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 P4HA1P13674 534 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 CCNE1P24864 410 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
GGCX-202ENST00000421496 ANXA13P27216 316 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 SOX9P48436 509 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 USP46P62068 366 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 UBE2HP62256 183 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TNK2Q07912 1038 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 PPP3CAQ08209 521 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 FZD5Q13467 585 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TAF4BQ92750 862 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
GGCX-202ENST00000421496 SMARCE1Q969G3 411 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TRPC7Q9HCX4 862 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
GGCX-202ENST00000421496 THG1LQ9NWX6 298 aaKnown RBP12.11□□□□□ -0.47
GGCX-202ENST00000421496 GTSE1Q9NYZ3 720 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
GGCX-202ENST00000421496 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 COL4A2P08572 1712 aa12.11□□□□□ -0.47
GGCX-202ENST00000421496 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
GGCX-202ENST00000421496 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
GGCX-202ENST00000421496 C2orf78A6NCI8 922 aa12.1□□□□□ -0.47
GGCX-202ENST00000421496 SOBPA7XYQ1 873 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms