RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 SUFUQ9UMX1 484 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MAFBQ9Y5Q3 323 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ERBB2P04626 1255 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ITGB3P05106 788 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ATP2A2P16615 1042 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ALDH3A1P30838 453 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ELK3P41970 407 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 CDH6P55285 790 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 BMPR2Q13873 1038 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 TTC25Q96NG3 672 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 TBC1D10AQ9BXI6 508 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 PCDH9Q9HC56 1237 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 NRBP2Q9NSY0 501 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.47□□□□□ -0.41
LIMK1-202ENST00000418310 TXLNGQ9NUQ3 528 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ARMCX1Q9P291 453 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 RABGEF1Q9UJ41 708 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 LOXHD1Q8IVV2 1947 aa12.47□□□□□ -0.41
LIMK1-202ENST00000418310 ALOX15BO15296 676 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TOM1L1O75674 476 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TCEA3O75764 348 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PDHA1P08559 390 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 NFICP08651 508 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 MIPP30301 263 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 RAD23BP54727 409 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 RTP1P59025 263 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PIGHQ14442 188 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PDK4Q16654 411 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 RNF43Q68DV7 783 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PPM1NQ8N819 430 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 MECRQ9BV79 373 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 SLC13A1Q9BZW2 595 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ADGRA2Q96PE1 1338 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 KBTBD13C9JR72 458 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 MSCO60682 206 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ARIH2O95376 493 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TNNC2P02585 160 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 MT-ND3P03897 115 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 GM2AP17900 193 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 BGNP21810 368 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PEX19P40855 299 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TAF11Q15544 211 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 KBTBD12Q3ZCT8 623 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ANKRD20A2Q5SQ80 823 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ANKRD20A1Q5TYW2 823 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ANKRD20A3Q5VUR7 823 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ASRGL1Q7L266 308 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TTC7BQ86TV6 843 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 PDIK1LQ8N165 341 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ATP11CQ8NB49 1132 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 TRPM4Q8TD43 1214 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 HEXIM2Q96MH2 286 aaKnown RBP12.46□□□□□ -0.41
LIMK1-202ENST00000418310 ZNF395Q9H8N7 513 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-202ENST00000418310 GGA3Q9NZ52 723 aa12.46□□□□□ -0.41
LIMK1-202ENST00000418310 CEP350Q5VT06 3117 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 A0A1B0GUA9 196 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 KDELR1P24390 212 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 FAAP100Q0VG06 881 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.42
LIMK1-202ENST00000418310 SGSM1Q2NKQ1 1148 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 PPP6R3Q5H9R7 873 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-202ENST00000418310 RFWD3Q6PCD5 774 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 WDR49Q8IV35 697 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 PPIL6Q8IXY8 311 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 FAM13CQ8NE31 585 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-202ENST00000418310 CPB2Q96IY4 423 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 SDCBP2Q9H190 292 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 MINDY3Q9H8M7 445 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 PIM2Q9P1W9 311 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.42
LIMK1-202ENST00000418310 MCF2LO15068 1137 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 OGTO15294 1046 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 LPXNO60711 386 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 NEBLO76041 1014 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 PYGBP11216 843 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ASPAP45381 313 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ZNF132P52740 706 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 NR1H3Q13133 447 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 PTK7Q13308 1070 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ZNF667Q5HYK9 610 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 CATSPERGQ6ZRH7 1159 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ZBTB8OSQ8IWT0 167 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 C12orf29Q8N999 325 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms