RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PCED1BQ96HM7 432 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 CYP2S1Q96SQ9 504 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 VRTNQ9H8Y1 702 aa19.1■□□□□ 0.65
CPNE1-210ENST00000416778 SPECC1L-ADORA2AF8WAN1 911 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 PHACTR2O75167 634 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 TADA3O75528 432 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 RHOBTB3O94955 611 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 DLG4P78352 724 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 GAS6Q14393 721 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 TDRD10Q5VZ19 366 aaKnown RBP19.09■□□□□ 0.65
CPNE1-210ENST00000416778 ZC3H14Q6PJT7 736 aaKnown RBP19.09■□□□□ 0.65
CPNE1-210ENST00000416778 TXNDC11Q6PKC3 985 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 KRBA2Q6ZNG9 492 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 SYAP1Q96A49 352 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-210ENST00000416778 CEP295NLQ96MC4 621 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 GOLPH3LQ9H4A5 285 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 NXF1Q9UBU9 619 aaKnown RBP19.09■□□□□ 0.65
CPNE1-210ENST00000416778 TRAF3IP3Q9Y228 551 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 FRYLO94915 3013 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 GVINP1Q7Z2Y8 2422 aa19.09■□□□□ 0.65
CPNE1-210ENST00000416778 ZNF202O95125 648 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 VNN1O95497 513 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 NR3C1P04150 777 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 CTHP32929 405 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 GRIK1P39086 918 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 CDH8P55286 799 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 TNNC1P63316 161 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 CYP27A1Q02318 531 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 ZNF268Q14587 947 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-210ENST00000416778 TSSK4Q6SA08 328 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 FSIP1Q8NA03 581 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 SUMF1Q8NBK3 374 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 ZBTB44Q8NCP5 570 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 RIN3Q8TB24 985 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 TMC2Q8TDI7 906 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 SLC22A12Q96S37 553 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 PRMT8Q9NR22 394 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-210ENST00000416778 ZSCAN32Q9NX65 697 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 GCNT4Q9P109 453 aa19.08■□□□□ 0.64
CPNE1-210ENST00000416778 OTOL1A6NHN0 477 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-210ENST00000416778 TDGF1P13385 188 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 USP46P62068 366 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 ITPRIPL2Q3MIP1 535 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 MDH1BQ5I0G3 518 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 C1orf220Q5T0J3 134 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 C8orf48Q96LL4 319 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 IER2Q9BTL4 223 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 B3GNT5Q9BYG0 378 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 DPEP3Q9H4B8 488 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 GDPD2Q9HCC8 539 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 HPS4Q9NQG7 708 aa19.07■□□□□ 0.64
CPNE1-210ENST00000416778 COL4A2P08572 1712 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 MIA3Q5JRA6 1907 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 A8MXQ7 604 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 IKBKBO14920 756 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 LILRB5O75023 590 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 BIRC3Q13489 604 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 RUNX3Q13761 415 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 NCOA4Q13772 614 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 SGSM1Q2NKQ1 1148 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 ZACNQ401N2 412 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 DGKKQ5KSL6 1271 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 SV2AQ7L0J3 742 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 ATRIPQ8WXE1 791 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 ELMO3Q96BJ8 720 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 TTLL2Q9BWV7 592 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 KIF9Q9HAQ2 790 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 RBM12Q9NTZ6 932 aaKnown RBP19.06■□□□□ 0.64
CPNE1-210ENST00000416778 TMEM30AQ9NV96 361 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 PCDHGA2Q9Y5H1 932 aa19.06■□□□□ 0.64
CPNE1-210ENST00000416778 SPTBN4Q9H254 2564 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 GPR179Q6PRD1 2367 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 C2orf78A6NCI8 922 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 CALUO43852 315 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 USP17L7P0C7H9 530 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 HDCP19113 662 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 CACNA2D1P54289 1103 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 MCCD1P59942 119 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 NOP14P78316 857 aaKnown RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 FAM160A1Q05DH4 1040 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 KCNB1Q14721 858 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 PON2Q15165 354 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 NFIL3Q16649 462 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 TRIM68Q6AZZ1 485 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 DENND5BQ6ZUT9 1274 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 SPEM1Q8N4L4 309 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 ARL14EPQ8N8R7 260 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 CCDC47Q96A33 483 aaKnown RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 CHFRQ96EP1 664 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 FAM126AQ9BYI3 521 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-210ENST00000416778 SDCBP2Q9H190 292 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 EBF3Q9H4W6 596 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 SMYD3Q9H7B4 428 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 TRPC7Q9HCX4 862 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 MAPK8IP1Q9UQF2 711 aa19.05■□□□□ 0.64
CPNE1-210ENST00000416778 TICRRQ7Z2Z1 1910 aa19.04■□□□□ 0.64
CPNE1-210ENST00000416778 TRAV19A0A0A6YYK7 116 aa19.04■□□□□ 0.64
CPNE1-210ENST00000416778 F8VP50 259 aa19.04■□□□□ 0.64
CPNE1-210ENST00000416778 CLDN5O00501 218 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms