RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	PCDHA4	Q9UN74	947 aa		9.44	□□□□□ -0.9
NIF3L1-206	ENST00000416651	KCNJ14	Q9UNX9	436 aa		9.44	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PTPRQ	Q9UMZ3	2332 aa		9.44	□□□□□ -0.9
NIF3L1-206	ENST00000416651	DENND4C	Q5VZ89	1909 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651		H7C4K7	107 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651		J3QKU1	62 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TNFRSF10B	O14763	440 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PPEF2	O14830	753 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ARHGAP6	O43182	974 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	OPHN1	O60890	802 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	LARGE1	O95461	756 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ATF6	P18850	670 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	DRD1	P21728	446 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MCM4	P33991	863 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CCT2	P78371	535 aa	Known RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	GAB4	Q2WGN9	574 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	XKR4	Q5GH76	650 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TXNDC8	Q6A555	127 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ZNF280D	Q6N043	979 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TOGARAM2	Q6ZUX3	1019 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	DHX32	Q7L7V1	743 aa	Known RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PRICKLE2	Q7Z3G6	844 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	EXOC8	Q8IYI6	725 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CMTM8	Q8IZV2	173 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	BLID	Q8IZY5	108 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	HDDC3	Q8N4P3	179 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	BICD2	Q8TD16	824 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CD101	Q93033	1021 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PSMG2	Q969U7	264 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CNOT6L	Q96LI5	555 aa	Known RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SLC22A12	Q96S37	553 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	RWDD1	Q9H446	243 aa	Predicted RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	IL21R	Q9HBE5	538 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CD93	Q9NPY3	652 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PPME1	Q9Y570	386 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	WNT6	Q9Y6F9	365 aa		9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ZNF638	Q14966	1978 aa	Known RBP	9.43	□□□□□ -0.9
NIF3L1-206	ENST00000416651	OBSL1	O75147	1896 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MUC22	E2RYF6	1773 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PIEZO2	Q9H5I5	2752 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MGA	Q8IWI9	3026 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651		A0A087WV48	116 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651		K7ELQ4	463 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SGK1	O00141	431 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ACKR2	O00590	384 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TLX3	O43711	291 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CBFA2T3	O75081	653 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	FBXO45	P0C2W1	286 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ATXN1L	P0C7T5	689 aa	Known RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	RHOQ	P17081	205 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	EIF2S3	P41091	472 aa	Known RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	OPRD1	P41143	372 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	GPR15	P49685	360 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	RNF144A	P50876	292 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	EPHB3	P54753	998 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MCCD1	P59942	119 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SDHAF4	Q5VUM1	108 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PEAR1	Q5VY43	1037 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	LYSMD4	Q5XG99	296 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	FOXR1	Q6PIV2	292 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651		Q6ZUG5	572 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	LPCAT2	Q7L5N7	544 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SLC41A1	Q8IVJ1	513 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TRIM22	Q8IYM9	498 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ALLC	Q8N6M5	410 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	BRF1	Q92994	677 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ZBTB45	Q96K62	511 aa	Predicted RBP	9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PRIMPOL	Q96LW4	560 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	UROC1	Q96N76	676 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CYP2S1	Q96SQ9	504 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	HSD17B14	Q9BPX1	270 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SEMA4C	Q9C0C4	833 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CDT1	Q9H211	546 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	PRORY	Q9H606	182 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ECT2	Q9H8V3	914 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CYLD	Q9NQC7	956 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SLC6A14	Q9UN76	642 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	NUB1	Q9Y5A7	615 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ANK1	P16157	1881 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SPTA1	P02549	2419 aa		9.42	□□□□□ -0.9
NIF3L1-206	ENST00000416651	COL5A1	P20908	1838 aa	Predicted RBP	9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SCAMP3	O14828	347 aa	Known RBP	9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	DKC1	O60832	514 aa	Known RBP eCLIP	9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MAOB	P27338	520 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SLC6A11	P48066	632 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ATXN3	P54252	364 aa	Predicted RBP	9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	SRSF1	Q07955	248 aa	Known RBP eCLIP	9.41	□□□□□ -0.9	7e-6	■□□□□ 10.7
NIF3L1-206	ENST00000416651	CRY1	Q16526	586 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	MAPK6	Q16659	721 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ATF7IP2	Q5U623	682 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	TAS1R3	Q7RTX0	852 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	NAXD	Q8IW45	347 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	CCDC148	Q8NFR7	591 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	OR10T2	Q8NGX3	314 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ZNF592	Q92610	1267 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ACD	Q96AP0	544 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	FAM20A	Q96MK3	541 aa		9.41	□□□□□ -0.9
NIF3L1-206	ENST00000416651	ACAP3	Q96P50	834 aa		9.41	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms