RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 BRF2Q9HAW0 419 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 SEPSECSQ9HD40 501 aaKnown RBP6.51□□□□□ -1.37
XIST-201ENST00000416330 INCENPQ9NQS7 918 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 GPR27Q9NS67 375 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 CHCHD3Q9NX63 227 aaKnown RBP6.51□□□□□ -1.37
XIST-201ENST00000416330 STK32BQ9NY57 414 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 TMEFF2Q9UIK5 374 aaPredicted RBP6.51□□□□□ -1.37
XIST-201ENST00000416330 MSRAQ9UJ68 235 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 FAM169AQ9Y6X4 670 aa6.51□□□□□ -1.37
XIST-201ENST00000416330 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 M0QX08 132 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ARNTLO00327 626 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 WNT9AO14904 365 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 PROM1O43490 865 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 NEMFO60524 1076 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 RTN2O75298 545 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 NDST3O95803 873 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CBX7O95931 251 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 FERP16591 822 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 TMEM11P17152 192 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CYP7A1P22680 504 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 KRT2P35908 639 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 MATR3P43243 847 aaKnown RBP eCLIP6.5□□□□□ -1.37
XIST-201ENST00000416330 BCAR1P56945 870 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 PSMC6P62333 389 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 MRPS9P82933 396 aaKnown RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 IRF9Q00978 393 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 DSC2Q02487 901 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 IL10RAQ13651 578 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 PUM1Q14671 1186 aaKnown RBP eCLIP6.5□□□□□ -1.37
XIST-201ENST00000416330 DPY19L1Q2PZI1 675 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ARHGAP15Q53QZ3 475 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CYP4F22Q6NT55 531 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 KLHL17Q6TDP4 642 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 H1FNTQ75WM6 255 aaPredicted RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 GLRX5Q86SX6 157 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CXorf67Q86X51 503 aaPredicted RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 HID1Q8IV36 788 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 DIS3L2Q8IYB7 885 aaKnown RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 ADSSL1Q8N142 457 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 C10orf53Q8N6V4 93 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 MFSD2AQ8NA29 543 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 DRAXINQ8NBI3 349 aaPredicted RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 DEPDC1BQ8WUY9 529 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 NRG4Q8WWG1 115 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CUL5Q93034 780 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ATP6V0A1Q93050 837 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CFAP36Q96G28 342 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CCDC114Q96M63 670 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 CITED2Q99967 270 aaPredicted RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
XIST-201ENST00000416330 USP44Q9H0E7 712 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 NT5C3AQ9H0P0 336 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 PCIF1Q9H4Z3 704 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 SNTG1Q9NSN8 517 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ACTR3BQ9P1U1 418 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 DNAJB9Q9UBS3 223 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 MORF4L1Q9UBU8 362 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ANAPC5Q9UJX4 755 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 EXOC7Q9UPT5 735 aa6.5□□□□□ -1.37
XIST-201ENST00000416330 ARPC4-TTLL3A0A0A6YYG9 625 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 SLC12A8A0AV02 714 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 SGK1O00141 431 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 CCP110O43303 1012 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 CAMTA2O94983 1202 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 OPN1MWP04001 364 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 LPLP06858 475 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 THBDP07204 575 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 OPN1MW2P0DN77 364 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 OPN1MW3P0DN78 364 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 HSPA5P11021 654 aaKnown RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 LCP1P13796 627 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 MTHFD2P13995 350 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 CD40P25942 277 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 RFC1P35251 1148 aaPredicted RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 ASMTP46597 345 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 HK2P52789 917 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 ACTR2P61160 394 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 AP2B1P63010 937 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 HTD2P86397 168 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 AMPD2Q01433 879 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 DUSP4Q13115 394 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 PPP1R7Q15435 360 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 TBCCQ15814 346 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 GEN1Q17RS7 908 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 DCAF17Q5H9S7 520 aaPredicted RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 C3orf38Q5JPI3 329 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 KRBOX4Q5JUW0 171 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 ATG16L1Q676U5 607 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 CCDC62Q6P9F0 684 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 KLHDC10Q6PID8 442 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 MEX3BQ6ZN04 569 aaKnown RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 C16orf59Q7L2K0 433 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 NLRP10Q86W26 655 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 SCML4Q8N228 414 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 ZBTB8BQ8NAP8 495 aaPredicted RBP6.49□□□□□ -1.37
XIST-201ENST00000416330 OR1N1Q8NGS0 311 aa6.49□□□□□ -1.37
XIST-201ENST00000416330 CSGALNACT1Q8TDX6 532 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms